PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00580.1.g00030.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 380aa MW: 40460.3 Da PI: 8.9934

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00580.1.g00030.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	118.8	2e-37	33	93	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+ l+cprCds ntkfCyynnyslsqPr fCk+CrryWtkGG+lrn+P+Ggg+r+nk+s+ Zmw_sc00580.1.g00030.1.am.mk 33 PEQGLRCPRCDSPNTKFCYYNNYSLSQPRNFCKTCRRYWTKGGTLRNIPIGGGCRRNKRSR 93 67899*****************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	5.8E-31	35	91	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	2.0E-24	37	86	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.696	37	91	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	39	75	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence Send to blast
MTAVAAGDEL LKGGTSGGGG TTTPRQQQPP PPPEQGLRCP RCDSPNTKFC YYNNYSLSQP 60 RNFCKTCRRY WTKGGTLRNI PIGGGCRRNK RSRSTTSRVS LNLRSVIVNA SIDQQQSSTR 120 LGRFLGGGGA MVTSSPIGGV TSADYQPGAA AGSMPPPRLN IPAVGQYVPF VEWSSGPTAV 180 DLTGGGGNSS AAAAMRSTIA SFIESQSFIN QDLHWKLQQQ RLSTVSLAQP TSSAAGHTAP 240 RRVEELYEST YSRPPLHDPH EPGLAMIELS AHDHVTTAQS TTRLAMIELS AHGHVTTAQS 300 TTRLGHHSCR PLRRQPAPIY WIMDSSCVFL SPPQPANTTS AVMATTTPNC NINSGLSSGD 360 HAMFNNSCDV GTIPTDDPIP

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence Send to blast

MTAVAAGDEL LKGGTSGGGG TTTPRQQQPP PPPEQGLRCP RCDSPNTKFC YYNNYSLSQP  60
RNFCKTCRRY WTKGGTLRNI PIGGGCRRNK RSRSTTSRVS LNLRSVIVNA SIDQQQSSTR  120
LGRFLGGGGA MVTSSPIGGV TSADYQPGAA AGSMPPPRLN IPAVGQYVPF VEWSSGPTAV  180
DLTGGGGNSS AAAAMRSTIA SFIESQSFIN QDLHWKLQQQ RLSTVSLAQP TSSAAGHTAP  240
RRVEELYEST YSRPPLHDPH EPGLAMIELS AHDHVTTAQS TTRLAMIELS AHGHVTTAQS  300
TTRLGHHSCR PLRRQPAPIY WIMDSSCVFL SPPQPANTTS AVMATTTPNC NINSGLSSGD  360
HAMFNNSCDV GTIPTDDPIP

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025796800.1	3e-63	dof zinc finger protein DOF5.7-like
TrEMBL	A0A3L6SBJ5	1e-63	A0A3L6SBJ5_PANMI; Dof zinc finger protein DOF5.7-like
STRING	OPUNC03G22610.1	1e-61	(Oryza punctata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP140	37	367