PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00532.1.g00210.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 791aa    MW: 84700.2 Da    PI: 11.6755
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00532.1.g00210.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.2e-20591642156
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                   ++y+GVr ++ +gr++AeIrdp    k+ r++lg+++taeeAa+a++aa+++++g+
  Zmw_sc00532.1.g00210.1.am.mk 591 PHYRGVRKRP-WGRFAAEIRDPA---KKSRVWLGTYDTAEEAARAYDAAAREFRGA 642
                                   68********.**********83...36*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.61E-16591650No hitNo description
PfamPF008476.8E-14591641IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-31592649IPR001471AP2/ERF domain
PROSITE profilePS5103224.408592649IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-22592650IPR016177DNA-binding domain
SMARTSM003808.7E-38592655IPR001471AP2/ERF domain
PRINTSPR003673.0E-10593604IPR001471AP2/ERF domain
PRINTSPR003673.0E-10615631IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 791 aa     Download sequence    Send to blast
MTYGGESEKP RARREATVEL DTRPPDHHLV AAAIAQSRPM GNRTLPSVVK WAATRVGDND  60
LDAREGILPV NRSTNVAHLP AARRGAPAAR SYQVPSWSRR RPPAGLHLAA MNFSVHNCVS  120
EVRRNLAVIE GRYLRRRLTF SRRGVERGLT RPAGQTARGG GAGACGWLSC LSVYGGHLEI  180
KSGQRRWVPH GPAIQGSKQS ESLPMPTSRW RGTRRQAHRS GPHAEPDLAV SVVTARPSCD  240
RSRHGTRTVA FPLRLTARAS SKAFGLTADE PSRRACRSVR FRRKKPRKFG PPLAASSRIF  300
ARSRALRQRN KKEPTSLAAG LPSANRERVL SARVESRGTS RERVACAGRT GGTRTTDSEG  360
AEAAAVPRVF TPAACPADAD ADAPPPLTPA RDARIVMRRL PRRGARDVLA RRAALSSPLH  420
VGSASRGFAE KAGDSGDLRR KRPRDTCHTL RKIAGPQVTG AEKRPQNFNA ASLKTSGGGE  480
DRTVKPLAVC AEFYSLSPLF TTRRPLSPLR AVLFLTPRPP INGAPLKPRL ILDATSTHPT  540
SAPRRTETPA PARHLYTPGA APMALKTAEK TPVSPATGLG LGVGGGVGMG PHYRGVRKRP  600
WGRFAAEIRD PAKKSRVWLG TYDTAEEAAR AYDAAAREFR GAKAKTNFPY GSSQCPAPAG  660
AGSPSSNCTL DSSSSGCGAQ APMQAMPLPP SLDHDLFHRT AAGIRFPFKG FPVALPAPNP  720
YFFYEQAAAA AAAASGYRML KVAPPVTVAA VAQSDSDSSS VVDHTPSPPA ATTKKEAAFD  780
LDLNWPPPEE N
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-21590649363ATERF1
3gcc_A6e-21590649363ATERF1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38463174