PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00515.1.g00170.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family Trihelix
Protein Properties Length: 331aa    MW: 35330.9 Da    PI: 6.9261
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00515.1.g00170.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix40.76.1e-1323124186
                      trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..............rergferspkqCkekwenlnkrykkikeg 67 
                                   +Wt++ +  L+ea++ ++   +r+klk  +W +++  +                +   ++p+qCk+k+e+++kry+++ + 
  Zmw_sc00515.1.g00170.1.sm.mk  23 EWTESGIARLLEAYEAKWLLRNRAKLKWSDWVDIAGEVsahcaedaaatgkpGGGNSAKTPNQCKNKIESMKKRYRAESAA 103
                                   5*******************************9999999999********877777899******************9998 PP

                      trihelix  68 ekkr..tsessstcpyfdqle 86 
                                   + +   ++ +  ++++f +++
  Zmw_sc00515.1.g00170.1.sm.mk 104 KARAgpAAAAGPSWRFFARMD 124
                                   8887445667789****9997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138374.4E-1421125No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MDGLPDGDAA PVASAAPPQK RDEWTESGIA RLLEAYEAKW LLRNRAKLKW SDWVDIAGEV  60
SAHCAEDAAA TGKPGGGNSA KTPNQCKNKI ESMKKRYRAE SAAKARAGPA AAAGPSWRFF  120
ARMDGLLKGP AGCSGQAQQV EPGNSIDLCA PAKAEVEAEA DFAAQLPDAG PGAFADLMNV  180
DANGSVPEKP EKVDNSVHKE SRAADSDANV SSPRSKVANE DAEEADKLCD LPKKRKTTEL  240
AIAKSIELLA SSFLKVEHAR MEMYRETERM RIEAEIKKGE MELKRAEIMA KTHLRIAKLF  300
AKRLKVGGGR TGGSSSVTAE VDTLTAKGED G
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025802935.11e-172trihelix transcription factor ASIL1-like
TrEMBLA0A0A9E1521e-179A0A0A9E152_ARUDO; Uncharacterized protein
STRINGPavir.Ba01421.1.p1e-177(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP73333346