PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00515.1.g00170.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | Trihelix | ||||||||
Protein Properties | Length: 331aa MW: 35330.9 Da PI: 6.9261 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 40.7 | 6.1e-13 | 23 | 124 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..............rergferspkqCkekwenlnkrykkikeg 67 +Wt++ + L+ea++ ++ +r+klk +W +++ + + ++p+qCk+k+e+++kry+++ + Zmw_sc00515.1.g00170.1.sm.mk 23 EWTESGIARLLEAYEAKWLLRNRAKLKWSDWVDIAGEVsahcaedaaatgkpGGGNSAKTPNQCKNKIESMKKRYRAESAA 103 5*******************************9999999999********877777899******************9998 PP trihelix 68 ekkr..tsessstcpyfdqle 86 + + ++ + ++++f +++ Zmw_sc00515.1.g00170.1.sm.mk 104 KARAgpAAAAGPSWRFFARMD 124 8887445667789****9997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 4.4E-14 | 21 | 125 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence Send to blast |
MDGLPDGDAA PVASAAPPQK RDEWTESGIA RLLEAYEAKW LLRNRAKLKW SDWVDIAGEV 60 SAHCAEDAAA TGKPGGGNSA KTPNQCKNKI ESMKKRYRAE SAAKARAGPA AAAGPSWRFF 120 ARMDGLLKGP AGCSGQAQQV EPGNSIDLCA PAKAEVEAEA DFAAQLPDAG PGAFADLMNV 180 DANGSVPEKP EKVDNSVHKE SRAADSDANV SSPRSKVANE DAEEADKLCD LPKKRKTTEL 240 AIAKSIELLA SSFLKVEHAR MEMYRETERM RIEAEIKKGE MELKRAEIMA KTHLRIAKLF 300 AKRLKVGGGR TGGSSSVTAE VDTLTAKGED G |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025802935.1 | 1e-172 | trihelix transcription factor ASIL1-like | ||||
TrEMBL | A0A0A9E152 | 1e-179 | A0A0A9E152_ARUDO; Uncharacterized protein | ||||
STRING | Pavir.Ba01421.1.p | 1e-177 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7333 | 33 | 46 |