PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00491.1.g00130.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 389aa    MW: 41902 Da    PI: 7.4538
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00491.1.g00130.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY60.53.2e-19212271358
                                   -SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTT..EEEEEEES--SS CS
                          WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpk..vveitYegeHnh 58 
                                   Dg+ WrKYGqK+++g ++pr Y+rC+++  gC+++++v+r++e+++  + ei Y g+H++
  Zmw_sc00491.1.g00130.1.am.mk 212 DGFIWRKYGQKKINGRKHPRLYHRCAYShqGCTATRRVQRTHEEEQppAYEIAYYGHHTC 271
                                   9************************88777**********9977553389********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.8E-20205271IPR003657WRKY domain
SuperFamilySSF1182901.57E-18205271IPR003657WRKY domain
SMARTSM007749.2E-23210273IPR003657WRKY domain
PfamPF031067.8E-21212271IPR003657WRKY domain
PROSITE profilePS5081116.34212257IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    Send to blast
MRWPEQGVGR RSLAEDRSLG RWLVHACGAL KGRRGVETGL TCRGVKPGLT CRGVRHHFGF  60
ASLSGPTPIN TPGIWAHLAA SDPAVSFKLA VLPAETTETN KATSEPRLWV MAPPSNAHAV  120
VLEQMTMGQE SAAHLVYLLP ASPHQELAAE ILRCCGRVIA AIRAGGGGEK RKAVEHEDAA  180
ATTAVATCFP PRKRSRGAEA PIRVVTSGTT VDGFIWRKYG QKKINGRKHP RLYHRCAYSH  240
QGCTATRRVQ RTHEEEQPPA YEIAYYGHHT CCGAGASSAP APPPYVVDSG SNAWVSVGGL  300
APPSEHHQLL SWDGEMSSAS SAETGFEAEA QTVHEWHDTA RTEEPSATAL PYAPDPVTQF  360
LDGSFDWASV LNDDPFDFGS ALQHVATLQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A4e-142122711068OsWRKY45
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025817680.16e-92probable WRKY transcription factor 66
TrEMBLA0A2S3HQI11e-90A0A2S3HQI1_9POAL; Uncharacterized protein
STRINGSi002401m4e-83(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP83223147