PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00452.1.g00090.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 694aa    MW: 75462.4 Da    PI: 11.1928
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00452.1.g00090.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.71.4e-18577629156
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                                   ++y+GVr+++ +g+++AeIrd s    +  r +lg+f+taeeAa+a+++ + +++g+
  Zmw_sc00452.1.g00090.1.am.mk 577 PKYRGVRRRP-WGKFAAEIRDSSR---HgVRMWLGTFDTAEEAARAYDRSAYAMRGA 629
                                   79********.**********432...25*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.5E-13577628IPR001471AP2/ERF domain
CDDcd000183.46E-28577638No hitNo description
Gene3DG3DSA:3.30.730.102.6E-30578637IPR001471AP2/ERF domain
SuperFamilySSF541713.6E-22578637IPR016177DNA-binding domain
SMARTSM003806.9E-34578642IPR001471AP2/ERF domain
PROSITE profilePS5103223.841578636IPR001471AP2/ERF domain
PRINTSPR003671.7E-10579590IPR001471AP2/ERF domain
PRINTSPR003671.7E-10602618IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009789Biological Processpositive regulation of abscisic acid-activated signaling pathway
GO:0010186Biological Processpositive regulation of cellular defense response
GO:0010200Biological Processresponse to chitin
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0090332Biological Processstomatal closure
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 694 aa     Download sequence    Send to blast
MERRGRRPWR PARRGRAGFI APRSRKRIEF FDSSMDADVD HLSGARRRSR QADVGRLYAT  60
GGLSVTPSPL ASPFPFSSGL RHACRHRPDA PPLLDNRSLP CVAFALPPLR QGLRSPQVAS  120
PKQMLPMVPN VVILCLGVPL TTLPPLRSAA AADRVGAGGD CCFDDASVRG VARTVEGSSE  180
EGDLLYYYDI TRHRRRRHHG PNEEGSRTEH RVATCAVCNC GRTVNCGWIL FARWSTFLLP  240
AAGGRLPCPC LSKALIAANL AISFIGVARA SRIASFPIHS RGARPGSCGD HGLYRQAGLT  300
QPVDEVCLKD TIESTRPSDT IRSELHREGR GRKTRAISRG ACTAASSAPG PWRRRATPPQ  360
PHDEKARGVG PALTASSPCP RHSPHLAPAA GSKGSQRLRG ATKSHTCPPA RRWARSCSPP  420
GPGGAQSGGL SGRGRFPPVS LTATARAAAG RSMDDHLPRY LHHSASIVEQ EQPAKELGGI  480
LWREGEIHGR NQIPHVPGPP SISLSHVFPS PFLNPRPARL RPAAVHPSTH PPIDHSLVNL  540
ARCRSPSIIV EASPTPGTRT AKRLRSMDGG GEGDPHPKYR GVRRRPWGKF AAEIRDSSRH  600
GVRMWLGTFD TAEEAARAYD RSAYAMRGAN AVLNFPEDAQ VYAREQRGSS SSSSSSSRQQ  660
HQQPGRSSEV IEFEYLDDAV LQEMLRNHDE RKKK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-315676801114Ethylene-responsive transcription factor ERF096
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00029PBMTransfer from AT5G43410Download
Motif logo
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465