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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc00442.1.g00230.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
MYB |
Protein Properties |
Length: 301aa MW: 33624.7 Da PI: 8.4806 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc00442.1.g00230.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 50.1 | 6.2e-16 | 76 | 123 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W++eEde+lv ++++G +W++I++ g+ R++k+c++rw++yl
Zmw_sc00442.1.g00230.1.am.mk 76 KGLWSPEEDERLVSHIARFGVSCWSSIPELTGLQRCGKSCRLRWLNYL 123
678*******************************************97 PP
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2 | Myb_DNA-binding | 47.8 | 3.2e-15 | 129 | 171 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
rgr++++E++l++ ++k lG+ W+ Ia++++ gR+++++k++w+
Zmw_sc00442.1.g00230.1.am.mk 129 RGRFSQQEEDLIIALHKTLGNS-WSQIAARLP-GRSDNEIKNFWN 171
89******************99.*********.***********8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 301 aa
Download sequence Send
to blast |
MSGSFDPSNR RLSKMDVWDG FLGLKLIKHD YWMEGTRLET TYRSVAAFAM GASTAARAYQ 60 MGRVRPCCSP EKKLRKGLWS PEEDERLVSH IARFGVSCWS SIPELTGLQR CGKSCRLRWL 120 NYLRPDLKRG RFSQQEEDLI IALHKTLGNS WSQIAARLPG RSDNEIKNFW NARLRKKLRQ 180 KEASSKDHVA SRSRNHREDE RKEPPPAMFN PLLPRDEDHI TCSGAATSSC DESSAAGSAA 240 AAKLQMPSAA SSASASTEAA GDSQDDFLRA MVEDASYLFG DFYLDGSQDG LSSFWEGHAF 300 S
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 172 | 178 | RLRKKLR |
2 | 173 | 179 | LRKKLRQ |