PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00431.1.g00450.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | Dof | ||||||||
Protein Properties | Length: 295aa MW: 31286.2 Da PI: 7.6168 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 117.8 | 4.3e-37 | 28 | 83 | 6 | 61 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +cprC s ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rkn++ Zmw_sc00431.1.g00450.1.sm.mk 28 PSCPRCGSPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRG 83 58***************************************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 2.0E-29 | 14 | 82 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.658 | 28 | 82 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 2.8E-31 | 29 | 82 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 30 | 66 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 295 aa Download sequence Send to blast |
MLPPYPAGGR RAVLLDHRRY RPNVEVAPSC PRCGSPNTKF CYYNNYSLSQ PRYFCKGCRR 60 YWTKGGSLRN VPVGGGCRKN RRGKSARSLA AGGGAATFSH RFPGALRPDL LLEGMAGSPA 120 GIVGSQPVSA DKPGVADGSA IDLALLYAKF LNPNAVQCPV VKESADMTSG SSSDMSPNAA 180 PQPDQPFSSQ DAFGNNLPVP SSTEPSAEPA LPLPDSRTEA LGDLSFSVDQ SCYQALGLPT 240 DSGELILPST WRHEAKYEPF DPLPAMSLHD SITGADDVWT NAPACQGLEA ALCRP |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. {ECO:0000250}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00405 | DAP | Transfer from AT3G52440 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004961942.1 | 1e-125 | dof zinc finger protein DOF1.8 | ||||
Swissprot | Q9SVC5 | 4e-39 | DOF35_ARATH; Dof zinc finger protein DOF3.5 | ||||
TrEMBL | A0A1D8F0J0 | 1e-128 | A0A1D8F0J0_9POAL; Dof protein | ||||
STRING | Si022633m | 1e-124 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2659 | 36 | 83 |