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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc00386.1.g00280.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
MYB |
Protein Properties |
Length: 265aa MW: 29526 Da PI: 7.193 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc00386.1.g00280.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 48.9 | 1.5e-15 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W++eEde+l+ ++++G +W++I++ g+ R++k+c++rw +yl
Zmw_sc00386.1.g00280.1.am.mk 16 KGLWSPEEDERLASHIARFGVSCWSSIPELTGLQRCGKSCRLRWMNYL 63
678*******************************************97 PP
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2 | Myb_DNA-binding | 45.8 | 1.4e-14 | 69 | 111 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
rgr+++ E++l++ ++k lG+ W+ Ia+ ++ gR+++++k++w+
Zmw_sc00386.1.g00280.1.am.mk 69 RGRFSQKEEDLIIALHKTLGNS-WSQIAANLP-GRSDNEIKNFWN 111
89******************99.*********.***********8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 265 aa
Download sequence Send
to blast |
MGRAHPCCSE EKKLRKGLWS PEEDERLASH IARFGVSCWS SIPELTGLQR CGKSCRLRWM 60 NYLRPDLKRG RFSQKEEDLI IALHKTLGNS WSQIAANLPG RSDNEIKNFW NARLRKKLRQ 120 REASTAGSKD PAVLRSRHRG EGDERKLQLP SAMFNPLCAA RVEDQPWGTA DHTMVSAVTS 180 STSCEDVVDY TTPGAVIADA HDRRNAAAAA ELQTLSASST EAVGGSEDDF LRAMVEEASH 240 LFGDFYNIDG SQDGRISFWE GHTFS
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 112 | 118 | RLRKKLR |
2 | 113 | 119 | LRKKLRQ |
3 | 114 | 120 | RKKLRQR |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that coordinates a small network of downstream target genes required for several aspects of plant growth and development, such as xylem formation and xylem cell differentiation, and lateral root formation (PubMed:22708996). Regulates a specific set of target genes by binding DNA to the AC cis-element 5'-ACCTAC-3' (PubMed:23741471). Functions as a transcriptional regulator of stomatal closure. Plays a role the regulation of stomatal pore size independently of abscisic acid (ABA) (PubMed:16005292). Required for seed coat mucilage deposition during the development of the seed coat epidermis (PubMed:19401413). Involved in the induction of trichome initiation and branching by positively regulating GL1 and GL2. Required for gibberellin (GA) biosynthesis and degradation by positively affecting the expression of the enzymes that convert GA9 into the bioactive GA4, as well as the enzymes involved in the degradation of GA4 (PubMed:28207974). {ECO:0000269|PubMed:16005292, ECO:0000269|PubMed:19401413, ECO:0000269|PubMed:22708996, ECO:0000269|PubMed:23741471, ECO:0000269|PubMed:28207974}. |