PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00318.1.g00130.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 432aa    MW: 46290.9 Da    PI: 10.1034
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00318.1.g00130.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH352.5e-11218264454
                                   HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                           HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                                   +h   Er RR+r+++ f+eL+ llP  +     +K +Ka+i  +A+ +Ik L
  Zmw_sc00318.1.g00130.1.am.mk 218 SHIFTERERRKRMRNMFAELKALLPDvP-----EKADKATIIGEAISFIKVL 264
                                   67889*********************77.....9***************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.66E-14211275IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.91E-12212265No hitNo description
PROSITE profilePS5088814.113214264IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.3E-14217278IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-8218264IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.7E-9220270IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550215.59E-5352403No hitNo description
PROSITE profilePS516718.933354432IPR002912ACT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    Send to blast
MMDRPTRTAA ALPHLLELES IQDPKKLLGH PAHVTQAPVP VLRFCTGLAP RPRWRRGARS  60
RLFAPPPCID QVTANKTFVF EFSLSRSATI PRIAAQKQAK QETVTSEETD GRRARKVAAC  120
SRQGTDASSD HGSAPPAPGV TVTALSPGEN SNSGPCAGVP VVAEEDAGKG KDVVVEHGSA  180
GSGHSDARVL PKGKRSAAEA LAREFEDAAS GRKKLMSSHI FTERERRKRM RNMFAELKAL  240
LPDVPEKADK ATIIGEAISF IKVLEGNVTT LQKRKQDLVL ARLAAAAVVN HVAATSAPPP  300
PGTPLAAAAS SDDLPRGWAW LPKQQEQKPA ASPVGFQSWC GTNVVLSVSK DDALISVSAP  360
NHPGLLVLLM SVLLKHRLDV LTAHVESDGD RRLYSFHARV NAEAVRMRGG EPPASEDIYK  420
LAVSEIIIWL ST
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1211228RKKLMSSHIFTERERRKR
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20053691