 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Zmw_sc00296.1.g00490.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 280aa MW: 30805.9 Da PI: 4.5059 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zmw_sc00296.1.g00490.1 | genome | ZGD | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 59.3 | 6.3e-19 | 31 | 83 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
++++ eq+++Le+ Fe +++++ +++++A++lgL+ rqV vWFqNrRa++k
Zmw_sc00296.1.g00490.1.sm.mkhc 31 KRRLALEQVRALERSFETDNKLDPGRKARIARELGLQPRQVAVWFQNRRARWK 83
4467789*********************************************9 PP
|
| 2 | HD-ZIP_I/II | 129.4 | 1.5e-41 | 29 | 121 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeener 79
ekkrrl+ eqv++LE+sFe+++kL+p rK+++areLglqprqvavWFqnrRAR+ktkqlE+d++aL++++d+l+++ ++
Zmw_sc00296.1.g00490.1.sm.mkhc 29 EKKRRLALEQVRALERSFETDNKLDPGRKARIARELGLQPRQVAVWFQNRRARWKTKQLERDFAALRARHDSLRADCDA 107
69***************************************************************************** PP
HD-ZIP_I/II 80 LekeveeLreelke 93
L++++++L++e++e
Zmw_sc00296.1.g00490.1.sm.mkhc 108 LHRDKDALAAEIRE 121
*********99986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 280 aa
Download sequence Send
to blast |
MEQEETEMDD DEDELADGRA ARSACGLGEK KRRLALEQVR ALERSFETDN KLDPGRKARI 60
ARELGLQPRQ VAVWFQNRRA RWKTKQLERD FAALRARHDS LRADCDALHR DKDALAAEIR 120
ELRQKLSKPE AAVKVEATCN DAVEDRQAAF GTSATIAVYK DGSSDSDSSV VFNDVEASPY 180
SGAVLEQPPQ QAGFVGFGES FMDSSAAATM GCPSFGTKWQ HGSMTYPCDD PYKAGSYGIM 240
EEWLAGSDVI SNDGAAGFFS DEHAPSLNFS WCASVAEGWD
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
