PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Zmw_sc00279.1.g00280.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 381aa MW: 41831.9 Da PI: 10.7322

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00279.1.g00280.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	73.2	3.6e-23	2	44	13	55
G2-like 13 rFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +Fv+ave+LGG+e+AtPk +l++m+v gL++ hvkSHLQ+YR+ Zmw_sc00279.1.g00280.1.sm.mk 2 AFVHAVERLGGQERATPKLVLQMMNVRGLSIGHVKSHLQMYRS 44 6*****************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	10.369	1	47	IPR017930	Myb domain
TIGRFAMs	TIGR01557	6.4E-16	2	46	IPR006447	Myb domain, plants
SuperFamily	SSF46689	1.79E-7	2	45	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	3.0E-19	2	45	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence Send to blast
MAFVHAVERL GGQERATPKL VLQMMNVRGL SIGHVKSHLQ MYRSKKLDQD GRPRGAVSSV 60 HSPMDFHFMR GERGFHGLSF LQRAAALSSS GPEHGGFFAS RNGGRTNFSR IYGLLQHHRQ 120 PQMQSFDFRS SSFRRHERAL NQREEVITRK EVFKPPSTSR PQPHHPLAPS PASISSERRW 180 WPFADAGAAV AGEHTRVDTG QGANFESSFG SNSRPLSWVV SGDLHLPFRW RPGSGGSHVS 240 NNTAMIRKPS DPVVIDEAPD DAQQLERQEY VEPIRGACRK RPLPEAQDST APDLQLSLSH 300 SPTAAVDDAK KRKTAAAAGK QEVIHSSELS ISLSLWPPAA ASMQLQHPPR EKTRGSSGSG 360 SGEAVLGQST LDLTMSIRAL E

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence Send to blast

MAFVHAVERL GGQERATPKL VLQMMNVRGL SIGHVKSHLQ MYRSKKLDQD GRPRGAVSSV  60
HSPMDFHFMR GERGFHGLSF LQRAAALSSS GPEHGGFFAS RNGGRTNFSR IYGLLQHHRQ  120
PQMQSFDFRS SSFRRHERAL NQREEVITRK EVFKPPSTSR PQPHHPLAPS PASISSERRW  180
WPFADAGAAV AGEHTRVDTG QGANFESSFG SNSRPLSWVV SGDLHLPFRW RPGSGGSHVS  240
NNTAMIRKPS DPVVIDEAPD DAQQLERQEY VEPIRGACRK RPLPEAQDST APDLQLSLSH  300
SPTAAVDDAK KRKTAAAAGK QEVIHSSELS ISLSLWPPAA ASMQLQHPPR EKTRGSSGSG  360
SGEAVLGQST LDLTMSIRAL E

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025824409.1	1e-146	uncharacterized protein LOC112899951 isoform X1
TrEMBL	A0A0A9QQ16	1e-150	A0A0A9QQ16_ARUDO; Uncharacterized protein
STRING	Si016955m	1e-141	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2754	36	86