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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc00261.1.g00330.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
MYB |
Protein Properties |
Length: 323aa MW: 34483 Da PI: 6.7768 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc00261.1.g00330.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 59.1 | 1e-18 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd+llvd++++ G ++W++ ++ g++R++k+c++rw +yl
Zmw_sc00261.1.g00330.1.sm.mkhc 15 KGPWTPEEDKLLVDYIQKNGHRSWRRLPKLAGLNRCGKSCRLRWTNYL 62
79********************************************97 PP
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2 | Myb_DNA-binding | 55.3 | 1.5e-17 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg +T eE++l+++++ lG++ W++Ia +++ gRt++++k++w+++l
Zmw_sc00261.1.g00330.1.sm.mkhc 68 RGQFTDEEEKLIIHLHSVLGNK-WSSIATKLP-GRTDNEIKNYWNTHL 113
899*******************.*********.************996 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 323 aa
Download sequence Send
to blast |
MGRSPCCDQE SGVKKGPWTP EEDKLLVDYI QKNGHRSWRR LPKLAGLNRC GKSCRLRWTN 60 YLRPDIKRGQ FTDEEEKLII HLHSVLGNKW SSIATKLPGR TDNEIKNYWN THLRKKLLNM 120 GIDPVTHRPR TDLDLLAGLP NSNLLAAASN TTWDINALKL QADAAKFQLL QGLISAIAAA 180 AAPSVDLMAL LAASSAGLTQ TVSVDRGSSR SSQYDGFMNL PALTTAPTVS PGMTSFVGLL 240 NGFIGGSAHA GDGLSSTDLG QSGASGSSMT AAMAPPLVAA VACNAGAGVA TPCEETPASS 300 PFEELENLNL DDLSNDSWKD LLE
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250|UniProtKB:Q9M2D9}. |
UniProt | Transcription factor that acts as negative regulator of lateral root (LR) development. Required for normal auxin responses during LR development. May be part of a negative feedback loop stimulated specifically in the endodermis upon LR initiation to ensure that LRs are formed only in the correct place. {ECO:0000269|PubMed:24902892}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by abscisic acid (ABA), auxin and gravity in roots. {ECO:0000269|PubMed:24902892}. |
UniProt | INDUCTION: Induced by gravity in roots. {ECO:0000269|PubMed:24902892}. |