PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00220.1.g00040.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GeBP

Protein Properties

Length: 533aa MW: 57709 Da PI: 10.7719

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00220.1.g00040.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	92.5	4.8e-29	270	367	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsf 80 ++ r+ws eDe+++L++li f+ k+g s+ +d+ ++ +++++++ +++s++ql++KirrLK+K+k +ak+g+ep++ Zmw_sc00220.1.g00040.1.am.mk 270 RAPRVWSHEDEVTILRALIAFRGKKGRlpSSIQDTGKLESQIRGQLTANASTTQLSDKIRRLKHKYKLLAIRAKKGREPDL 350 5689*********************888888******************************************** PP DUF573 81 skehdqkifelskkiWg 97 ++hd++++els+k+Wg Zmw_sc00220.1.g00040.1.am.mk 351 PTDHDREMYELSNKVWG 367 **************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	7.9E-27	272	367	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 533 aa Download sequence Send to blast
MGPGSGGRRS EVRRTDVLSA VESLASLTQF SPAPPQTSNR QAAGRPNPAQ RIQDSNPPKT 60 LANSCTLAGM APKRPASAAA SGSASDASDA EAATGGHRRR RHSPSPVRSR SRSKTPPSTI 120 RPNAAALSST PTSAGADYAA ASDSDADGRV PSPRGRRERS RIPRSDSDVD AVGRIPAPLS 180 SPRRSRDGSP RFHSDSDPDN FGASENGGEG NVSTLPRARR STRIETSNIK PVSSRLMGKP 240 GRAAGASSSQ GGSKRRHRSP ALPTAEHHKR APRVWSHEDE VTILRALIAF RGKKGRLPSS 300 IQDTGKLESQ IRGQLTANAS TTQLSDKIRR LKHKYKLLAI RAKKGREPDL PTDHDREMYE 360 LSNKVWGYFS IDGFVEVGGS QNARDEESNE DQEIEESDEG MESGWDVHDQ PKKVKAFRFE 420 NGSRNAIAAN GNAFATGGSS KASQGGGGGG KDVSEKRKQM YPYLWEAVEE LSKDHPSGQI 480 FRKAFGVLEK AKAHAIEEKL RKFRMSEIRQ QLRRMDLMKD TVTMVLDALE DTG

Sequence ? help Back to Top

Protein Sequence Length: 533 aa Download sequence Send to blast

MGPGSGGRRS EVRRTDVLSA VESLASLTQF SPAPPQTSNR QAAGRPNPAQ RIQDSNPPKT  60
LANSCTLAGM APKRPASAAA SGSASDASDA EAATGGHRRR RHSPSPVRSR SRSKTPPSTI  120
RPNAAALSST PTSAGADYAA ASDSDADGRV PSPRGRRERS RIPRSDSDVD AVGRIPAPLS  180
SPRRSRDGSP RFHSDSDPDN FGASENGGEG NVSTLPRARR STRIETSNIK PVSSRLMGKP  240
GRAAGASSSQ GGSKRRHRSP ALPTAEHHKR APRVWSHEDE VTILRALIAF RGKKGRLPSS  300
IQDTGKLESQ IRGQLTANAS TTQLSDKIRR LKHKYKLLAI RAKKGREPDL PTDHDREMYE  360
LSNKVWGYFS IDGFVEVGGS QNARDEESNE DQEIEESDEG MESGWDVHDQ PKKVKAFRFE  420
NGSRNAIAAN GNAFATGGSS KASQGGGGGG KDVSEKRKQM YPYLWEAVEE LSKDHPSGQI  480
FRKAFGVLEK AKAHAIEEKL RKFRMSEIRQ QLRRMDLMKD TVTMVLDALE DTG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012702606.1	1e-166	STOREKEEPER protein
TrEMBL	A0A0A9BR30	1e-176	A0A0A9BR30_ARUDO; Uncharacterized protein
STRING	Si013598m	1e-165	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2671	35	87