PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00195.1.g00400.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | WRKY | ||||||||
Protein Properties | Length: 225aa MW: 25045 Da PI: 6.6194 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 28.6 | 2.8e-09 | 20 | 65 | 19 | 59 |
SS-EEEEEE-ST...T---EEEEEE-S..SSTTEEEEEEES--SS- CS WRKY 19 efprsYYrCtsa...gCpvkkkversa..edpkvveitYegeHnhe 59 +f sY+rCt++ gC ++k v++++ +d+ +++++Y+++H+++ Zmw_sc00195.1.g00400.1.am.mk 20 PFKGSYFRCTYKddtGCLATKYVQQKNdrSDTPMFQVIYNNDHTCN 65 56679******99999*******9876226999***********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00774 | 2.3E-7 | 14 | 66 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 5.62E-9 | 18 | 65 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.8E-11 | 18 | 64 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 1.2E-8 | 19 | 65 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence Send to blast |
MIDRRLRVEE IWREEDQRHP FKGSYFRCTY KDDTGCLATK YVQQKNDRSD TPMFQVIYNN 60 DHTCNCIAAS SSSAKKNIST LPIPGGAAGH RDFVVTEQEA TAVALPPLAD VSSVDVALDE 120 QIQEPFAITD HCDFTIGAAG EIWANRLRTV RSGQHVQHVP FWTMASSSSP PPPGFKRLIK 180 QSCKLLAAED HSQTQQAGVR VYTREDAGKR MQQTASSGTG EWTVE |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP27829 | 3 | 4 |