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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00195.1.g00380.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | WRKY | ||||||||
Protein Properties | Length: 86aa MW: 9779.78 Da PI: 8.7106 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 27.9 | 4.7e-09 | 40 | 60 | 2 | 22 |
--SS-EEEEEEE--TT-SS-E CS WRKY 2 dDgynWrKYGqKevkgsefpr 22 dDg++WrKYG K+ +s+fpr Zmw_sc00195.1.g00380.1.sm.mkhc 40 DDGHQWRKYGEKKLSNSNFPR 60 8*******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.6E-8 | 28 | 61 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.72E-9 | 32 | 64 | IPR003657 | WRKY domain |
SMART | SM00774 | 8.4E-5 | 39 | 81 | IPR003657 | WRKY domain |
Pfam | PF03106 | 8.0E-7 | 40 | 61 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 86 aa Download sequence Send to blast |
MALDSVPLYP GGDLGSGSRA TSRAHHQRIS WTADTYAPYD DGHQWRKYGE KKLSNSNFPR 60 FCPSQMHIQE RNEVCRYKAS PAEGHQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020172253.1 | 5e-25 | WRKY transcription factor 55-like | ||||
TrEMBL | A0A3B6IP02 | 1e-23 | A0A3B6IP02_WHEAT; Uncharacterized protein | ||||
TrEMBL | A0A446R2R1 | 1e-23 | A0A446R2R1_TRITD; Uncharacterized protein | ||||
TrEMBL | A0A446RY79 | 1e-23 | A0A446RY79_TRITD; Uncharacterized protein | ||||
TrEMBL | A0A453HPE7 | 1e-23 | A0A453HPE7_AEGTS; Uncharacterized protein | ||||
TrEMBL | M8CYI1 | 1e-23 | M8CYI1_AEGTA; WRKY transcription factor 55 | ||||
TrEMBL | W5DRW6 | 1e-23 | W5DRW6_WHEAT; Uncharacterized protein | ||||
STRING | EMT28936 | 2e-24 | (Aegilops tauschii) | ||||
STRING | MLOC_34522.1 | 2e-24 | (Hordeum vulgare) | ||||
STRING | Traes_4AL_9E0D1CFA6.1 | 2e-24 | (Triticum aestivum) | ||||
STRING | Traes_4BS_A6D9EB0E5.1 | 5e-24 | (Triticum aestivum) | ||||
STRING | Traes_4DS_FE38A59D0.1 | 2e-24 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2032 | 35 | 100 |