PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00182.1.g00120.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 319aa    MW: 33777.9 Da    PI: 5.3714
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00182.1.g00120.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.14.4e-18147192251
                             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaark 51 
                                     +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa+ ++aa++
  Zmw_sc00182.1.g00120.1.sm.mkhc 147 RYRGVRRRP-WGKWAAEIRDP-----HraARVWLGTFDTAEAAARSYDAAAL 192
                                     7********.**********7.....338*********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.2E-12147192IPR001471AP2/ERF domain
PROSITE profilePS5103222.339147206IPR001471AP2/ERF domain
SMARTSM003807.6E-25147211IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.8E-25147196IPR001471AP2/ERF domain
SuperFamilySSF541714.12E-17147194IPR016177DNA-binding domain
PRINTSPR003673.1E-11148159IPR001471AP2/ERF domain
PRINTSPR003673.1E-11170186IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MCDAAVEDPG EQRRRLLAAG EDPVMSLSPP ALSRSRQAQE MSAMVSALAR VVAGSAPPAA  60
TSAAPVSAEE APWWPWEELD DAPPSALALN AHGAARQPHE QHWPPAPAAA AGASSSWQHR  120
VSTKDELLSP PSGGSAAGER SAPRSRRYRG VRRRPWGKWA AEIRDPHRAA RVWLGTFDTA  180
EAAARSYDAA ALXXXXPESA TLPSSPPTPQ QQHLPPAASR TLPPPSRPEA LLESHSQQQA  240
LPGAEAGDYA EYARFLQDAG DGEPGGSSST SLSVSPAPFS FGAEREGGGS GSHDPATSPS  300
AHWYGGTYPQ WRWGWDQED
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-151471921460Ethylene-responsive transcription factor ERF096
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025808413.13e-59ethylene-responsive transcription factor ABR1-like
TrEMBLA0A2T7E5K03e-65A0A2T7E5K0_9POAL; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP98942540