PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00180.1.g00300.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 597aa MW: 64117.9 Da PI: 9.9761 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.4 | 2.1e-19 | 418 | 467 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+taeeAa +++a+ +l+g Zmw_sc00180.1.g00300.1.am.mk 418 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALVYDQAAYRLRG 467 59******9.**********955...5*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 9.41E-29 | 417 | 477 | No hit | No description |
PROSITE profile | PS51032 | 22.853 | 418 | 475 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 9.81E-22 | 418 | 477 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 2.9E-31 | 418 | 477 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.5E-34 | 418 | 481 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 5.9E-13 | 419 | 467 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.5E-10 | 419 | 430 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.5E-10 | 441 | 457 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 597 aa Download sequence Send to blast |
MWPCLFVPRA ATTIPAFFDH GEGQRFDPDQ SLVRVLIQII GSPDGIASPS SDVQVKLPAR 60 CGSRQGWSTS LHRGRKIKQQ HLELQPPGRT SSSSIRGDTL RAKPGRFPGH MLLHETRRRR 120 DGSSPPRLLW RHGEDVARAT RNVAGRDAAA QANTKHRHIQ QEQATLPHHK RSSDLAISTH 180 PPTPARDPIH ERPRNYGAVW GQKTPVPETG GSAGSAIIAD THLESGYQRS KGEVTPQSSV 240 TASLKQLPRE TDQAGPVYPR PAAAAAAAAY KTAPRPPFFV LAPIPFHSPH PFPRAPTSHS 300 HPPPQSMAAA IDLSAEELMR ALEPFIRDAS APHGSIPLIP HQLASPPSPF AFHDASTAAA 360 CSSYAGAGAG QLSPAQMQYI QARLHLQQRQ AQSSVLGPRA QPMKASAAAA PLPRPQKLYR 420 GVRQRHWGKW VAEIRLPRNR TRLWLGTFDT AEEAALVYDQ AAYRLRGDAA RLNFPDNAAA 480 RGPLDASVDA KLQALCENIA ASKKASKASA AAAVTSSSGP TSNCSSPSSD DASSSSLESA 540 ESSPSPSLSP SLSPEAATVP EMQQLDFSEA PWDEAAGFAL TKYPSYEIDW DSLLAAN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 1e-18 | 417 | 475 | 4 | 63 | ATERF1 |
3gcc_A | 1e-18 | 417 | 475 | 4 | 63 | ATERF1 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP382 | 35 | 203 |