|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Zmw_sc00175.1.g00440.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
Family |
MYB |
Protein Properties |
Length: 249aa MW: 26322.6 Da PI: 8.5701 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc00175.1.g00440.1 | genome | ZGD | - |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 55 | 1.9e-17 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
rg+W++eEde l +v+++G+g +W + +++ g++R++k+c++rw++yl
Zmw_sc00175.1.g00440.1.sm.mkhc 14 RGPWSPEEDEALRSYVQRHGSGgNWIALPKKAGLKRCGKSCRLRWLNYL 62
89*********************************************97 PP
|
2 | Myb_DNA-binding | 45.1 | 2.3e-14 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
g +T+eEd +v + qlG++ W++Ia+ + gRt++++k++w++
Zmw_sc00175.1.g00440.1.sm.mkhc 69 GGFTEEEDAVIVSLYSQLGSK-WSLIASQLE-GRTDNDVKNYWNT 111
569******************.*********.***********97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 249 aa
Download sequence Send
to blast |
MGRTPCCDRT AVKRGPWSPE EDEALRSYVQ RHGSGGNWIA LPKKAGLKRC GKSCRLRWLN 60 YLRPDIRHGG FTEEEDAVIV SLYSQLGSKW SLIASQLEGR TDNDVKNYWN TKLKKRLAAA 120 ALSVSTPSPP PLARPPVPTP AASHTSTSLF PSIAIPSVKT KTYTCDDFLA PAAFIRDTSL 180 ASGGGSTPPS AASSASTWST DNGAAAAAAA ADGFLLDFCG GSSTDLGASG QLELPGGYYY 240 PLDPSLSLV
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription activator (By similarity). Positively regulates axillary meristems (AMs) formation and development, especially during inflorescence. {ECO:0000250, ECO:0000269|PubMed:16461581}. |