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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Zmw_sc00174.1.g00560.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
B3 |
Protein Properties |
Length: 249aa MW: 27915.2 Da PI: 7.3625 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc00174.1.g00560.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 95.2 | 4.3e-30 | 38 | 128 | 1 | 87 |
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkeg 77
f+k ltpsdv+k++rlv+pk++ae++ g ++e++ l++ede g+ W+++++y+ +s++yvltkGW+++vk+++L++g
Zmw_sc00174.1.g00560.1.sm.mk 38 FEKPLTPSDVGKLNRLVIPKQHAERYfplsGDSSEKGLILSFEDEAGKPWRFRYSYWTSSQSYVLTKGWSRYVKEKHLDAG 118
99****************************88889999******************************************* PP
-EEEEEE-SS CS
B3 78 DfvvFkldgr 87
D+v F+ +g
Zmw_sc00174.1.g00560.1.sm.mk 119 DVVHFEGMGG 128
******7654 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 249 aa
Download sequence Send
to blast |
MALNHTPISQ EHPQAWPWGV AMYTNLHYHH YYERERLFEK PLTPSDVGKL NRLVIPKQHA 60 ERYFPLSGDS SEKGLILSFE DEAGKPWRFR YSYWTSSQSY VLTKGWSRYV KEKHLDAGDV 120 VHFEGMGGFG IGDRMFIGFR RRGESATPAA APLPAVRVVA AAQSAGEQQP PWSPVCYSTS 180 GLYPNSPANS YAYRRSVDHD PSNTPHAGES SAASVPSRRL RLFGVNLDCG PEPEAEAPTF 240 PEPNYWSAL
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5os9_A | 8e-50 | 33 | 142 | 3 | 113 | B3 domain-containing transcription factor NGA1 |
5os9_B | 8e-50 | 33 | 142 | 3 | 113 | B3 domain-containing transcription factor NGA1 |
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