PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00154.1.g00470.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 396aa MW: 43268.9 Da PI: 11.3794 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 46.2 | 1.1e-14 | 169 | 219 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIr p k +r++l +++ta e a+a+++a+ +l+g Zmw_sc00154.1.g00470.1.am.mk 169 RYRGVRQRP-WGKYAAEIRYP---ArKGARVWLSTYDTAVEVARAYDRAAFRLRG 219 7********.**********8...4445*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 2.7E-30 | 169 | 233 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 8.24E-25 | 169 | 228 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 6.6E-28 | 169 | 228 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.6E-10 | 169 | 219 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 5.3E-19 | 169 | 228 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 22.8 | 169 | 227 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.4E-13 | 170 | 181 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.4E-13 | 209 | 229 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 396 aa Download sequence Send to blast |
MEFGKSKITI SSDPSFARRG SQATNAVPVR LVVPQKETVA TVIHRIARGL WCFRPAVDFD 60 PVPQLESLLG SRASRRELGI SMPFRLLHRR RLFAGKGIEY PLSCAAAVPV GWCVGLDRPR 120 PIGTARKRRW AAYFPVLRPV TPGQHAQGAA QARQQQLEQC GYAEDDFRRY RGVRQRPWGK 180 YAAEIRYPAR KGARVWLSTY DTAVEVARAY DRAAFRLRGS KAILNFPNEV AFGAAVRWAP 240 SAAPLTNSYA AAGNKRTRLP EPSLLWETAE CLREVKKERV AAPVEGREAR AQMCLKGRGQ 300 GVDRGTSTRS LMRSIFFSLL GRALPKEPLN RFPCLVFLSP RPHVTASASE DTAAAGTGTE 360 GRAGVMRPAN AAAAKCIAIL PSSALLAATT AFGSSA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 2e-24 | 168 | 233 | 4 | 69 | ATERF1 |
3gcc_A | 2e-24 | 168 | 233 | 4 | 69 | ATERF1 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP103 | 37 | 465 |