PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00148.1.g00350.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | GeBP | ||||||||
Protein Properties | Length: 435aa MW: 46297.7 Da PI: 6.1953 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 30.3 | 1.2e-09 | 75 | 105 | 2 | 32 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsd 32 lfqrlw++eDeiv+L+++ +f+a++g+ + Zmw_sc00148.1.g00350.1.am.mk 75 LFQRLWTDEDEIVILRAFAEFTAQRGTAFAS 105 69************************95444 PP | |||||||
2 | DUF573 | 98.7 | 5.5e-31 | 128 | 226 | 3 | 97 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkeps 79 ++rlw++eDeiv+L+++ +f+a++g+ +++ d++ fye ++++++ ++ksqlveK+rrLK+K++++v++ + g ++s Zmw_sc00148.1.g00350.1.am.mk 128 PRRLWTDEDEIVILRAFAEFTAQRGTafASHQyDTTPFYEDMRGRLQTGFTKSQLVEKLRRLKRKYRNCVDRlRVAGPSFS 208 68************************9977778***************************************88899**** PP DUF573 80 fskehdqkifelskkiWg 97 f+++h+q ife+++ iW+ Zmw_sc00148.1.g00350.1.am.mk 209 FRSPHEQAIFEIARTIWR 226 *****************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 3.4E-28 | 129 | 225 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 435 aa Download sequence Send to blast |
MFPMVDDPSA AAGGGAMVSS SFPDADAYGN GNGDSEDIDF PAGPNSHASF SAAPATTAAT 60 SAGAGGPGSG ERRALFQRLW TDEDEIVILR AFAEFTAQRG TAFASHQTCA AASRPGSPRA 120 SSXXXXRPRR LWTDEDEIVI LRAFAEFTAQ RGTAFASHQY DTTPFYEDMR GRLQTGFTKS 180 QLVEKLRRLK RKYRNCVDRL RVAGPSFSFR SPHEQAIFEI ARTIWRPGSD KHGRDSDDEG 240 NEDALAVDAA AAAAAAAAGA RVNGDSARSP SSRSRRGRRR RKGDFPATDT AEALPPAPMP 300 AMTTEDALPS FPQPTAMDGG TITMDPAAAG LPAVLSAAAT VATPGTAENP ILASLFKEMI 360 RSMLNISSSS APLGLEPPPP AIPGMPMDGE KWRQQRILEL EVYLRRIALL QDQAQAALEE 420 LRSAPPHHGA GGMNT |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025794014.1 | 1e-146 | probable transcription factor At3g04930 | ||||
TrEMBL | A0A2T7CC96 | 1e-144 | A0A2T7CC96_9POAL; Uncharacterized protein | ||||
TrEMBL | A0A2T8I4R3 | 1e-144 | A0A2T8I4R3_9POAL; Uncharacterized protein | ||||
STRING | GRMZM2G026417_P01 | 1e-141 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP974 | 37 | 123 |