PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00117.1.g00750.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Trihelix

Protein Properties

Length: 335aa MW: 36657.4 Da PI: 10.6635

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00117.1.g00750.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	41	5e-13	40	126	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.......rergferspkqCkekwenlnkrykkikegekkrt 72 +W++ e+ aL+ a ++ +++rg+l++++W+ev++++ +r r+ +qCk++ + l+k+yk+++ + Zmw_sc00117.1.g00750.1.sm.mkhc 40 CWSDGETAALVSAWGSRYIEVNRGNLRQKQWQEVADAVnsrrgasVRRRPPRTDVQCKNRVDTLKKKYKAERVRGAP-- 116 7************************************99999888888999************99877775.. PP trihelix 73 sessstcpyfdqle 86 s +++f++l+ Zmw_sc00117.1.g00750.1.sm.mkhc 117 ----SGWSFFHELD 126 ....5699*998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	2.8E-25	38	128	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence Send to blast
MEVREMAMAA AAAAAAAAAT GGGGGKLPPP NPNLPYREDC WSDGETAALV SAWGSRYIEV 60 NRGNLRQKQW QEVADAVNSR RGASVRRRPP RTDVQCKNRV DTLKKKYKAE RVRGAPSGWS 120 FFHELDRLVG PTLNGSVSKK PSPSPAPLQF ALPVQSPAIR KPPSPSMSPS PPPPMALPLP 180 NYRHGSPLPA AALIQQEAAA AAAAMSDSED SGDAGGRNNY NSQQSPSRSV SPLSGNNKKR 240 SRHEAESIGD RAFRELARAI EAFAEMYERV ENAKQKHELE MEWQRIDFLK QLEVKRMENF 300 ADAHVKLMRV KRTKKTAGSG DHRRSHLSNV TQVKA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002440242.1	1e-131	trihelix transcription factor ASIL2
TrEMBL	A0A0A9IAS8	1e-140	A0A0A9IAS8_ARUDO; Uncharacterized protein
STRING	Sb09g028350.1	1e-130	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2065	32	79