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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Zmw_sc00115.1.g00360.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
B3 |
Protein Properties |
Length: 271aa MW: 29616.6 Da PI: 10.1474 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc00115.1.g00360.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 95.4 | 3.8e-30 | 31 | 142 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHH CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvk 70
f+kv tpsdv+k++rlv+pk++ae++ +++ ++ l++ed++g+ W+++++y+++s++yv+tkGW++Fvk
Zmw_sc00115.1.g00360.1.sm.mk 31 FEKVVTPSDVGKLNRLVIPKQHAERYfpalgsaaseaASNEGKGLVLSFEDREGKAWRFRYSYWNSSQSYVMTKGWSRFVK 111
99*******************************999988888999************************************ PP
HHT--TT-EEEEEE-.SS..SEE..EEEEE- CS
B3 71 angLkegDfvvFkld.gr..sefelvvkvfr 98
+++L +gD+v F + g+ ++++++ ++r
Zmw_sc00115.1.g00360.1.sm.mk 112 EKRLGAGDTVAFARGtGDaaARGRFFIDFCR 142
************9443332456666666666 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 271 aa
Download sequence Send
to blast |
MEFGRIAAAQ EDSERARGGG GVAWLEREHM FEKVVTPSDV GKLNRLVIPK QHAERYFPAL 60 GSAASEAASN EGKGLVLSFE DREGKAWRFR YSYWNSSQSY VMTKGWSRFV KEKRLGAGDT 120 VAFARGTGDA AARGRFFIDF CRRRQDVAFL QPSALQRLPL PSVPISCPWP QEYGAYNPAA 180 APNRHVLFLR PQMPSAVVLT SVPVRVAASA VEATRSKRVR LFGVNLDSPP VMEDNSRATG 240 TVSTFLQLPS PSSSTSSSTA GKDLCSLDLG L
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5os9_A | 2e-53 | 26 | 143 | 3 | 113 | B3 domain-containing transcription factor NGA1 |
5os9_B | 2e-53 | 26 | 143 | 3 | 113 | B3 domain-containing transcription factor NGA1 |
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