PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00107.1.g00110.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

BES1

Protein Properties

Length: 840aa MW: 89971 Da PI: 7.9077

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00107.1.g00110.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	191.9	2.4e-59	520	634	2	119
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaa 82 g gr+ptwkErEnnkrRERrRRaiaaki++GLRa Gnyklpk++DnneVlkALcreAGwvvedDGt yrkg+kp+ + Zmw_sc00107.1.g00110.1.am.mk 520 GVGRMPTWKERENNKRRERRRRAIAAKIFTGLRALGNYKLPKHCDNNEVLKALCREAGWVVEDDGTAYRKGCKPP----PG 596 789**********************************************************************....78 PP DUF822 83 gssasaspesslq.sslkssalaspvesysaspksssf 119 +sa +sp+ss+q +s+ ss++aspv+sy+asp+s + Zmw_sc00107.1.g00110.1.am.mk 597 AASAGMSPCSSSQlLSAPSSSFASPVPSYHASPASPTR 634 88999****9****************998654 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.600.10	2.5E-75	39	267	IPR008949	Isoprenoid synthase domain
SuperFamily	SSF48576	2.09E-66	43	268	IPR008949	Isoprenoid synthase domain
CDD	cd00685	1.86E-55	67	267	No hit	No description
Pfam	PF00348	9.0E-39	69	267	IPR000092	Polyprenyl synthetase
PROSITE pattern	PS00723	0	119	135	IPR000092	Polyprenyl synthetase
Pfam	PF11145	4.8E-5	270	370	IPR021319	Protein of unknown function DUF2921
Pfam	PF05687	4.0E-56	521	646	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0008299	Biological Process	isoprenoid biosynthetic process

Sequence ? help Back to Top
Protein Sequence Length: 840 aa Download sequence Send to blast
MWDGEIGLAG GMCRGAPVTS HRRRFSAIVA TAVASTVTEF DFKAYMGELA AAVNQALDAA 60 IPAGEPPAAL HEAMRYALLA GGKWVRPALC LAACGVAGGR EAWAMPPAAA LEMVHTMSLI 120 HDDLPCMDDD DLRRGKPTCH VVFGEPIAVL AGDALLSLAF RHMASVHSYP KDVDPDKHPA 180 RVVRAIGELA RCIGSEGLVA GQVVDLEMTG STEIVPLEKL EYIHLHKTAA LLEASVVIGA 240 IIGGGSDEQI ERLRKYARSI GLLFQMQSHV STCPACSWAP MALRHGTART AVNVSGCMSF 300 TVTRGHCCAP MEPYESPEFE LGSGFATLHV VFERVYMEMM SPAGNDDHDH GGGERVLFMV 360 GSAVLPVCGS NGSDPWDWAK RPKTGSTDRY YFDRSSSHMP PARRGRAEAT GPRDSSSLVA 420 HGRRIRESRS GAVTVDPFDR PSGLLHHPRT HRAAWPGPER ESSKRGAARH DTSTSIPLHS 480 AAAKPRLSPP RHPFLSVGER AEERKEGRGA TMTSGTPAGG VGRMPTWKER ENNKRRERRR 540 RAIAAKIFTG LRALGNYKLP KHCDNNEVLK ALCREAGWVV EDDGTAYRKG CKPPPGAASA 600 GMSPCSSSQL LSAPSSSFAS PVPSYHASPA SPTRARRREH PDTIPECDES DVSTVDSGRW 660 ISFQMAPTTA PASPAYNLVN RGGGSTSNPM ELDGAAPAER GRGGPEFEFD KGRVVTPWEG 720 ERIHEVAAEE LELTLGVGAK PDSPHGELGS LCSCGLHHSR QEAIEPEINP VACADEKADC 780 CGAMGISVAY RSFLPVVRVA GITKARRALR VWLPGSRPTA SSCPVDCSGS LVAPRARGWR

Sequence ? help Back to Top

Protein Sequence Length: 840 aa Download sequence Send to blast

MWDGEIGLAG GMCRGAPVTS HRRRFSAIVA TAVASTVTEF DFKAYMGELA AAVNQALDAA  60
IPAGEPPAAL HEAMRYALLA GGKWVRPALC LAACGVAGGR EAWAMPPAAA LEMVHTMSLI  120
HDDLPCMDDD DLRRGKPTCH VVFGEPIAVL AGDALLSLAF RHMASVHSYP KDVDPDKHPA  180
RVVRAIGELA RCIGSEGLVA GQVVDLEMTG STEIVPLEKL EYIHLHKTAA LLEASVVIGA  240
IIGGGSDEQI ERLRKYARSI GLLFQMQSHV STCPACSWAP MALRHGTART AVNVSGCMSF  300
TVTRGHCCAP MEPYESPEFE LGSGFATLHV VFERVYMEMM SPAGNDDHDH GGGERVLFMV  360
GSAVLPVCGS NGSDPWDWAK RPKTGSTDRY YFDRSSSHMP PARRGRAEAT GPRDSSSLVA  420
HGRRIRESRS GAVTVDPFDR PSGLLHHPRT HRAAWPGPER ESSKRGAARH DTSTSIPLHS  480
AAAKPRLSPP RHPFLSVGER AEERKEGRGA TMTSGTPAGG VGRMPTWKER ENNKRRERRR  540
RAIAAKIFTG LRALGNYKLP KHCDNNEVLK ALCREAGWVV EDDGTAYRKG CKPPPGAASA  600
GMSPCSSSQL LSAPSSSFAS PVPSYHASPA SPTRARRREH PDTIPECDES DVSTVDSGRW  660
ISFQMAPTTA PASPAYNLVN RGGGSTSNPM ELDGAAPAER GRGGPEFEFD KGRVVTPWEG  720
ERIHEVAAEE LELTLGVGAK PDSPHGELGS LCSCGLHHSR QEAIEPEINP VACADEKADC  780
CGAMGISVAY RSFLPVVRVA GITKARRALR VWLPGSRPTA SSCPVDCSGS LVAPRARGWR

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5xn5_A	1e-119	38	270	1	233	Os07g0580900 protein
5xn5_B	1e-119	38	270	1	233	Os07g0580900 protein
5xn6_A	1e-119	38	270	1	233	Os07g0580900 protein
5xn6_B	1e-119	38	270	1	233	Os07g0580900 protein
5xn6_E	1e-119	38	270	1	233	Os07g0580900 protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1943	2	3