 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Zmw_sc00062.1.g00470.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 208aa MW: 23061.9 Da PI: 7.093 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zmw_sc00062.1.g00470.1 | genome | ZGD | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 59.3 | 6.3e-19 | 115 | 167 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+++++ eq+++Le+ Fe +++ e++++LA+ lgL+ rqV +WFqNrRa++k
Zmw_sc00062.1.g00470.1.am.mk 115 KRRLSVEQVRTLERSFEVANKLEPERKAQLARALGLQPRQVAIWFQNRRARWK 167
44799***********************************************9 PP
|
| 2 | HD-ZIP_I/II | 128.3 | 3.1e-41 | 113 | 203 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLe 81
e+krrls eqv++LE+sFe +kLeperK++lar+Lglqprqva+WFqnrRAR+ktkqlEkdy+aL+r++da ++en++L
Zmw_sc00062.1.g00470.1.am.mk 113 ERKRRLSVEQVRTLERSFEVANKLEPERKAQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDALRRQLDAARAENDALL 193
69******************************************************************************* PP
HD-ZIP_I/II 82 keveeLreel 91
+++++L++e+
Zmw_sc00062.1.g00470.1.am.mk 194 AQNKKLHAEV 203
******9886 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 208 aa
Download sequence Send
to blast |
MATNGMAPSF FPANFLLQMQ QPLPHHHHLH PQQQAADHPH HHDHEHHLLA PPPPSLSPFL 60
HDFAGAMAPP PPMYPPDAVS DDLHAAEPQQ GGGAASDDEE GSAAAGGCGG AGERKRRLSV 120
EQVRTLERSF EVANKLEPER KAQLARALGL QPRQVAIWFQ NRRARWKTKQ LEKDYDALRR 180
QLDAARAEND ALLAQNKKLH AEVLFFVA
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 112 | 117 | ERKRRL |
| 2 | 161 | 169 | RRARWKTKQ |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| UniProt | Probable transcription factor. {ECO:0000250}. |
