PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00058.1.g00770.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bHLH | ||||||||
Protein Properties | Length: 868aa MW: 94475.5 Da PI: 10.8262 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 16.1 | 2.1e-05 | 709 | 730 | 5 | 26 |
HHHHHHHHHHHHHHHHHHHHCT CS HLH 5 hnerErrRRdriNsafeeLrel 26 h + ErrRR+r+N++fe+Lr+l Zmw_sc00058.1.g00770.1.am.mk 709 HMISERRRRERLNESFETLRRL 730 8889****************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 7.71E-6 | 698 | 730 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 6.1E-5 | 707 | 730 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 868 aa Download sequence Send to blast |
MTPPTLAQII ACQGPPTATA AAAPPAGIAV ARMSISRRGR PKGWSERNGD GEERVAVPAL 60 YTKKGRLDTT RGKRLATQAE AWYACVATRE ALVGDATGSL CPKGQRRRTE MRSGEVLVLR 120 FQRTCSSFPE PLPTGSEKRS LSPGGCMAFT RGHVESHFDR PPRHNPIRSG ASPPPPHARA 180 CLYITGFALS TRARRERASS SISRRSRLLQ VRHHQGSPAD RTPGTVRPTA TGPARRSQLH 240 ELLHSSERRA SGDLPFPRPL KPQWHVVHSG PDSFALPHST TAHSFHEHDR RRSQNPTAMD 300 MDAVQWLVSG QLLILRPFDL DKRERAWPRW KQVLQPETWR PVLYRGHGHA ASNYHEKQHS 360 RAAPLMDAIF ALAPGPRARV LERTAARIPG CLYLFLWAPV IAGPLVRSGH LFCLDTWIGN 420 GGVRVRAVFE AYRGSLCAVV SGCVPGWAFK DGRAYMELSE PDLTASASLQ VQQQCSTLIK 480 FDVVMQMAME IGLSSNDSPG AVADHVQQSL LEELMQMTPP RPPSSSSSSL PSLSIGSPEY 540 SSLIRSMTTT ATEPSSSRER HPLPLHPAAQ LPGFLPPVHG QAPFPSSEAE DAAMAQAILA 600 VIASSAPPAP ATTTPPPLSP PWLVRHRAQR SSPRRWTGAF KAYNAALPPR SRPRPGAPGQ 660 RVVKTAIALM VSVHMAMRER EIAAARQQEG VAAAGQPPPP QPTSSQLHHM ISERRRRERL 720 NESFETLRRL EAQLGLVVPS RTRQTASDDP SDTTTVQVDV TTGASTSTST PTAGQPRTVA 780 IRVTVRAECD LSELVIVLLA RIKETGRFVV VTVDAEQRSN DHAQVSITLR TTVGDDGDLD 840 ETALKEAVAK VVEEAVARPP SPRRHGSP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 712 | 717 | ERRRRE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022681563.1 | 0.0 | putative transcription factor bHLH041 | ||||
TrEMBL | A0A3L6PIY5 | 1e-171 | A0A3L6PIY5_PANMI; Uncharacterized protein | ||||
STRING | Si007981m | 1e-164 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3977 | 33 | 67 |