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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00057.1.g00170.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 282aa MW: 31443.2 Da PI: 6.0501 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 49.8 | 1.1e-15 | 9 | 149 | 4 | 128 |
NAM 4 GfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyat 70 f F P++ l+++yL+kkv+g + l + +++ d++++ P L + + +++ ++ yfF+k++ ++ Zmw_sc00057.1.g00170.1.sm.mk 9 SFSFCPSNALLINHYLHKKVDGADvfsdLANAAYFHDEDVCSARPDVLVRahtiparvpsREAGDGQRFYFFTKARFIGNK 89 589*********************8865333345**************744677776653222244466777777654444 PP NAM 71 ...gkrknratk.sgyWkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128 +r+ + t + +W+a g+ k+v ++ g + L ++ k +++ ek W+m ey++ Zmw_sc00057.1.g00170.1.sm.mk 90 lnmRSRTIKNTGdKETWHAEGSAKPVDG---TADGYMTKLSYHvKTGSKTVEKPGWIMTEYSF 149 1013344443334778*********965...6779999999995446666789********86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 21.865 | 6 | 165 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.27E-21 | 8 | 165 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.0E-12 | 10 | 148 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 282 aa Download sequence Send to blast |
MEMAAMDDSF SFCPSNALLI NHYLHKKVDG ADVFSDLANA AYFHDEDVCS ARPDVLVRAH 60 TIPARVPSRE AGDGQRFYFF TKARFIGNKL NMRSRTIKNT GDKETWHAEG SAKPVDGTAD 120 GYMTKLSYHV KTGSKTVEKP GWIMTEYSFK DTKEGDLVLC KIYKSPRVPG RSKAPSLPAM 180 SDRKRKVADD LEEATPSTQP RQIDEDHQHA AVLEFGAERS QLTQDMPANS NSNSALEDID 240 WSWFMPESEA ERSQPHLAKP ASSGSNVTLE DIKLWANLLL AD |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6280 | 15 | 45 |