PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00057.1.g00120.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 279aa MW: 31086.9 Da PI: 6.5183

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00057.1.g00120.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	51.8	2.6e-16	7	147	4	128
NAM 4 GfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyat 70 f F P++ l+++yL+kk++g + l + +++ d++++ P+ L + + +++ ++ yfF+k++ ++ Zmw_sc00057.1.g00120.1.am.mk 7 SFSFCPSNALLINHYLRKKIDGAEvfsnLANAAYFHDEDVCSARPEVLVRahtmparvpsREAGDGQQFYFFTKARFIGNK 87 589*******************8865333345**********744677776654322355577888887755544 PP NAM 71 ...gkrknratk.sgyWkatgkdkevlskkgelvglkktLvfykgrapk.gektdWvmheyrl 128 +r+ + t + +W+a g+ k+v ++ g + L ++ ++ pk ek W+m ey++ Zmw_sc00057.1.g00120.1.am.mk 88 lnmRSRTIKNTGdKETWHAEGSAKPVDG---TAEGYMTKLSYHVKTGPKtVEKPGWIMTEYSF 147 1013344443334778*****965...6789999966555515799*****86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	22.819	4	163	IPR003441	NAC domain
SuperFamily	SSF101941	2.48E-22	7	163	IPR003441	NAC domain
Pfam	PF02365	5.5E-12	8	146	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence Send to blast
MAAMDDSFSF CPSNALLINH YLRKKIDGAE VFSNLANAAY FHDEDVCSAR PEVLVRAHTM 60 PARVPSREAG DGQQFYFFTK ARFIGNKLNM RSRTIKNTGD KETWHAEGSA KPVDGTAEGY 120 MTKLSYHVKT GPKTVEKPGW IMTEYSFKDT KEGDLVLCKI YKSPRGPGRS KAPSLPAMSD 180 RKRKVADDLE EATPSTRPRQ IDENHQHAAV PEFGAERSQT QAMPASLDSN SALEDIDWSW 240 FMPESEAERS QPHLAKPASL GSNVTLEDIE LYAKLLLAD

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6280	15	45