|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Zmw_sc00044.1.g00500.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
Family |
B3 |
Protein Properties |
Length: 322aa MW: 35210.9 Da PI: 9.3872 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc00044.1.g00500.1 | genome | ZGD | - |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 94.9 | 5.6e-30 | 82 | 193 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHH CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvk 70
f+kv tpsdv+k++rlv+pk++ae++ +++ ++ l++ed++g+ W+++++y+++s++yv+tkGW++Fvk
Zmw_sc00044.1.g00500.1.am.mk 82 FEKVVTPSDVGKLNRLVIPKQHAERYfaalgsaaseaASNEGKGLVLSFEDREGKAWRFRYSYWNSSQSYVMTKGWSRFVK 162
99*******************************999988888999************************************ PP
HHT--TT-EEEEEE-.SS..SEE..EEEEE- CS
B3 71 angLkegDfvvFkld.gr..sefelvvkvfr 98
+++L +gD+v F + g+ ++++++ ++r
Zmw_sc00044.1.g00500.1.am.mk 163 EKRLGAGDTVAFARGtGDaaARGRFFIDFCR 193
************9443332455666666666 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 322 aa
Download sequence Send
to blast |
MLATDLIALQ SRSCSHPPSV EEGEEIPIVK VNSYSTQLEQ QLESRGVERV PMEFGRIAAA 60 QEDSERARGG GGAAWLEREH MFEKVVTPSD VGKLNRLVIP KQHAERYFAA LGSAASEAAS 120 NEGKGLVLSF EDREGKAWRF RYSYWNSSQS YVMTKGWSRF VKEKRLGAGD TVAFARGTGD 180 AAARGRFFID FCRRRQDVAF LQPSALQRLP LPSVPISCPW PQEYGAYNPA AAPNRHVLFL 240 RPQMPSAVVL TSVPVRVAAS AVEATRSKRV RLFGVNLDSP PVMEDKSRAT GTVSTFLQLP 300 SPSSSTSSST AGKDLCSLDL GL
|
3D Structure ? help Back to Top |
|
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5os9_A | 8e-52 | 77 | 194 | 3 | 113 | B3 domain-containing transcription factor NGA1 |
5os9_B | 8e-52 | 77 | 194 | 3 | 113 | B3 domain-containing transcription factor NGA1 |
Search in ModeBase |