PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00043.1.g00160.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 75aa MW: 8225.72 Da PI: 9.0051 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 42.1 | 2.7e-13 | 5 | 35 | 99 | 129 |
NAM 99 lvglkktLvfykgrapkgektdWvmheyrle 129 +vg+kktLvfy gr+p gekt+W+mheyrle Zmw_sc00043.1.g00160.1.sm.mk 5 VVGMKKTLVFYIGRSPWGEKTEWIMHEYRLE 35 69***************************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 16.842 | 1 | 62 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.44E-13 | 4 | 40 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.1E-7 | 6 | 34 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 75 aa Download sequence Send to blast |
MMPAVVGMKK TLVFYIGRSP WGEKTEWIMH EYRLEGSGKF CCPSSSSNIS KAAMTLCCGN 60 MQALAKHTMH GPVAT |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022679478.1 | 1e-15 | protein CUP-SHAPED COTYLEDON 1 | ||||
Refseq | XP_025801540.1 | 7e-16 | NAC domain-containing protein 79-like | ||||
TrEMBL | A0A1E5V4C4 | 5e-16 | A0A1E5V4C4_9POAL; NAC domain-containing protein 79 | ||||
STRING | Si030284m | 5e-15 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP36207 | 3 | 4 |