PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zmw_sc00026.1.g00630.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | NF-YA | ||||||||
Protein Properties | Length: 87aa MW: 8908.89 Da PI: 10.7771 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 41.3 | 5e-13 | 2 | 24 | 36 | 58 |
CBFB_NFYA 36 kpylheSRhkhAlrRpRgsgGrF 58 +pylheSRh hAlrR+RgsgGrF Zmw_sc00026.1.g00630.1.sm.mk 2 QPYLHESRHLHALRRARGSGGRF 24 89********************9 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51152 | 19.471 | 1 | 27 | IPR001289 | Nuclear transcription factor Y subunit A |
Pfam | PF02045 | 3.5E-10 | 2 | 24 | IPR001289 | Nuclear transcription factor Y subunit A |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 87 aa Download sequence Send to blast |
MQPYLHESRH LHALRRARGS GGRFLNTRNV DAVPGGGGQA PPSADAFTGF GVGDAPESTA 60 RSAMRDSVAV SGVVSAAEGG RCGALRF |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP27498 | 4 | 5 |