PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00020.1.g00070.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 271aa    MW: 27633.1 Da    PI: 10.3278
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00020.1.g00070.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY247.7e-08105125222
                                   --SS-EEEEEEE--TT-SS-E CS
                          WRKY   2 dDgynWrKYGqKevkgsefpr 22 
                                   +Dg++WrKYGqK+ kg+++ r
  Zmw_sc00020.1.g00070.1.am.mk 105 SDGCQWRKYGQKMAKGATVRR 125
                                   7***************98877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-889125IPR003657WRKY domain
SuperFamilySSF1182901.44E-697125IPR003657WRKY domain
PROSITE profilePS508119.00699126IPR003657WRKY domain
PfamPF031062.1E-5106125IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MQTHLQASGL SNASTRQLLE GRASSSTAQQ RADGAGVEVD EASDGAGDAS PSPSNAGNSD  60
FDGKTRISQD ATARPRDNGE QAPAELPGRK ARVSVRARSE APMISDGCQW RKYGQKMAKG  120
ATVRRGQEHP DHDVRGQPQP PASAGGHHHG EHHVGRGRHA ALRPGHEPRR RRGAPGPPPR  180
GAQSVMETVT AAIAADPNFT TALAAAISSV MAGGAPHQAP QTTPRGNDVA GDQGNGASSA  240
GGTSAPPITA GVHAASASPR FATQSCTTST T
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004967624.13e-43probable WRKY transcription factor 31
TrEMBLA0A3L6SL765e-42A0A3L6SL76_PANMI; Putative WRKY transcription factor 31
TrEMBLK3XG057e-42K3XG05_SETIT; Uncharacterized protein
STRINGSi000824m1e-42(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP43583260