PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00013.1.g00530.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family Trihelix
Protein Properties Length: 453aa    MW: 48480.8 Da    PI: 11.2014
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00013.1.g00530.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix66.94.2e-21196285186
                      trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtses 75 
                                   +Wt++e+laLiea+r+++e lr+g+l++++W++v++++        +   ++ +qC++k+e+l+kry++++ ++ +r+++ 
  Zmw_sc00013.1.g00530.1.am.mk 196 CWTHEETLALIEAYRDRWEMLRKGNLRAADWDDVADAVtsrcgrFPTAAPKTGVQCRHKIEKLRKRYRAERGRSAGRSKG- 275
                                   8*************************************998887778889*************************98443. PP

                      trihelix  76 sstcpyfdqle 86 
                                     ++p+++ l+
  Zmw_sc00013.1.g00530.1.am.mk 276 -PKWPFYQLLH 285
                                   .47****9875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.2E-21195285No hitNo description
PROSITE profilePS500906.04197259IPR017877Myb-like domain
SMARTSM005956.6E-6204292IPR006578MADF domain
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    Send to blast
LLPPAAGFPI RRKKSGRGRP RPTGEKARRG GHHHPPRPDT ALGHRGTDSA QCGAASSSSL  60
PSAAALRLHD KPLGGTTAPL RPPPHAAAQR WCRSPAGHFT ARPTPAAHHR TAPPLPPPPP  120
PYYDRFRSSS VPHLHHQTVD AFAAADRPSR DDAVSSPDLP PLAAPVAAAA AAAAAAASSG  180
GGGLGGGSGR RLPPPCWTHE ETLALIEAYR DRWEMLRKGN LRAADWDDVA DAVTSRCGRF  240
PTAAPKTGVQ CRHKIEKLRK RYRAERGRSA GRSKGPKWPF YQLLHVLAGN GAPDPSPNAI  300
VKIKTKGRSP PAAPPSPVSS PSSEEEAVRS RSLHGLISNG GAGSGLRFTI PKASRTRPSS  360
AAATRPDKSS NQGDTESEAM SEVAAALRAV GEGFVRMEER RLELSLQREK ERMEFEMKRT  420
QTMLDAQQLF LEAFLGKQHL PHKKARVSPA MED
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008659928.11e-150trihelix transcription factor ASIL1
TrEMBLA0A1X7YE921e-149A0A1X7YE92_MAIZE; Uncharacterized protein
STRINGGRMZM2G428470_P011e-150(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP56893250