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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc06807.1.g00020.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | bZIP | ||||||||
Protein Properties | Length: 115aa MW: 12674.3 Da PI: 7.3522 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 29.1 | 2.1e-09 | 78 | 114 | 2 | 38 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 +e++r rrk++NR++A+rsR+RK++++eeL+ ++ L Zjn_sc06807.1.g00020.1.am.mk 78 EERRRKRRKISNRLSAQRSRARKQQRLEELRATAARL 114 7899***************************998876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.4E-7 | 75 | 114 | No hit | No description |
PROSITE profile | PS50217 | 9.289 | 79 | 115 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 84 | 99 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 1.54E-10 | 87 | 115 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 115 aa Download sequence Send to blast |
MLSLQEALGH DTLVAPSCCG GLRDHDIITS GFTPWGPESC PTLDQVLMMA ASSATPSPPG 60 QELDGSMDAV ITADDDDEER RRKRRKISNR LSAQRSRARK QQRLEELRAT AARLR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 79 | 85 | RRRKRRK |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008665488.1 | 3e-29 | ocs element-binding factor 1-like | ||||
TrEMBL | A0A1D6L661 | 6e-28 | A0A1D6L661_MAIZE; Ocs element-binding factor 1 | ||||
STRING | GRMZM2G177046_P01 | 1e-28 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP13845 | 24 | 29 |