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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc02557.1.g00010.1.am.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 102aa MW: 12133.9 Da PI: 8.7555 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 45.6 | 2.2e-14 | 57 | 102 | 1 | 47 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL 47 lppGfrF Ptdeel+ +yL++k+ + +++ +i+++d+++++PwdL Zjn_sc02557.1.g00010.1.am.mk 57 LPPGFRFFPTDEELIIFYLARKAVDASFTS-ATIRDIDLHSFDPWDL 102 79*************************998.77*************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.41E-17 | 49 | 102 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 19.849 | 57 | 102 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.3E-6 | 58 | 93 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 102 aa Download sequence Send to blast |
LHHESPQAPH VTLNYQLFAV IKWTSSYLRC RVDRSSLRKF VCTRMLGEHH QRRMERLPPG 60 FRFFPTDEEL IIFYLARKAV DASFTSATIR DIDLHSFDPW DL |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002444391.1 | 2e-19 | NAC domain-containing protein 83 | ||||
TrEMBL | C5YL79 | 6e-18 | C5YL79_SORBI; Uncharacterized protein | ||||
STRING | Sb07g021200.1 | 9e-19 | (Sorghum bicolor) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP46515 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24430.2 | 4e-17 | NAC domain containing protein 38 |