PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Zjn_sc01994.1.g00010.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bHLH

Protein Properties

Length: 310aa MW: 32485.2 Da PI: 9.957

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc01994.1.g00010.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.3	0.00066	1	17	39	55
TCHHHHHHHHHHHHHHH CS HLH 39 sKaeiLekAveYIksLq 55 +K++i+++A++YI+sL+ Zjn_sc01994.1.g00010.1.am.mk 1 DKVTIVTEAINYIRSLE 17 69*************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:4.10.280.10	1.4E-4	1	36	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd02116	0.00266	235	282	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence Send to blast
DKVTIVTEAI NYIRSLEDTY QKLEKRKREL ALARQASQPD HGAGSSSAPP PYDAGQATGL 60 SPVLSLDLVG SSSVPPPDAS WLSMGLSPVL PLGRAGSSSV PPPGTFLGTG RSSFLPLGRA 120 GSSSAPPPGT FLGTGRPSFL PLGRAGSSSV PPPGSFLGTG QSSVLPLGRA DSSSVLPPPA 180 FLGTVRSSVL PQGWSWLPKR RKPEAGEVAV PRPIGFQTYA EANVGLNLMG DDAFIAVCVP 240 KRPGVLLLVL TILEKHHIDV ISGHILSDVN RSKFTLYTRV SSYILIDLSS SILVSWFPAF 300 GLTFGCRSSY

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP28209	3	5

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49770.1	1e-08	bHLH family protein