PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc01585.1.g00010.1.sm.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | WRKY | ||||||||
Protein Properties | Length: 202aa MW: 22216.8 Da PI: 4.9975 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 61.4 | 1.6e-19 | 102 | 161 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++D ++WrKYGqKe+++s+fpr t gC ++++v++s+ dp+v itY geH+++ Zjn_sc01585.1.g00010.1.sm.mk 102 MEDDHAWRKYGQKEIRDSKFPRYGEALTEDqGCLARRRVQQSDADPSVYLITYFGEHTCS 161 58********************888888878***************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 8.5E-19 | 96 | 161 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 16.421 | 97 | 163 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.14E-17 | 98 | 162 | IPR003657 | WRKY domain |
SMART | SM00774 | 6.8E-24 | 102 | 162 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.5E-18 | 103 | 160 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence Send to blast |
MATKPASAAS ELIAKGRDST AVLQAILGQQ PAAVAEMPDG IWELTEQIIR CCDRALAALQ 60 EGAASGAKKR EPEEHVMDAP RSKRMRVSDG ERGITVEKKW TMEDDHAWRK YGQKEIRDSK 120 FPRYGEALTE DQGCLARRRV QQSDADPSVY LITYFGEHTC SCSRDTDEPP ASLVINFGSG 180 RTRDGQLPSG CSPWPSCDDD GL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 1e-14 | 101 | 160 | 7 | 68 | OsWRKY45 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004980734.1 | 2e-61 | probable WRKY transcription factor 63 | ||||
TrEMBL | A0A2T7ECG0 | 4e-61 | A0A2T7ECG0_9POAL; Uncharacterized protein | ||||
TrEMBL | K3ZLW2 | 3e-61 | K3ZLW2_SETIT; Uncharacterized protein | ||||
STRING | Pavir.J07662.1.p | 2e-62 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4663 | 26 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 2e-17 | WRKY DNA-binding protein 70 |