PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc01244.1.g00010.1.sm.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | WRKY | ||||||||
Protein Properties | Length: 212aa MW: 23045.8 Da PI: 6.3873 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 28.9 | 2.3e-09 | 30 | 70 | 23 | 59 |
EEEEE-ST.T---EEEEEE...-SSSTTEEEEEEES--SS- CS WRKY 23 sYYrCtsa.gCpvkkkver...saedpkvveitYegeHnhe 59 YY+C +Cp+kkkv++ s++d ++e+tY ++H+++ Zjn_sc01244.1.g00010.1.sm.mk 30 YYYKCNGDrRCPAKKKVQQqdgSSDDAPMFEVTYVNDHTCH 70 5****9988********9833356899************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00774 | 1.7E-6 | 15 | 71 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.14E-8 | 29 | 70 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 6.0E-10 | 30 | 71 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.5E-10 | 30 | 70 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence Send to blast |
GTAVIRSLDQ HMTSKVVKLN LRRRRIKAPY YYKCNGDRRC PAKKKVQQQD GSSDDAPMFE 60 VTYVNDHTCH HVDDGSSQKS LPQTTTTGQQ RSGFEAAANR NSVALFDPLH RVGSAEENEA 120 IVSCLATVIS GTAPSSPGAE PVAPPVYLPQ SIAGASMVAD GAMAMLELDT GFSWDHPSSP 180 LCPAEVIMGF RDDVHMVDAA RFGDTVWPQY YT |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004972234.1 | 9e-38 | WRKY transcription factor WRKY62 | ||||
TrEMBL | K3XPF8 | 2e-36 | K3XPF8_SETIT; Uncharacterized protein | ||||
STRING | Si003782m | 3e-37 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP13243 | 26 | 32 |