PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00261.1.g00020.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GRAS

Protein Properties

Length: 358aa MW: 38509.7 Da PI: 9.7942

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00261.1.g00020.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	32.1	1.5e-10	77	154	87	172
GRAS 87 vsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetge 163 +sP++ ++ +aN aI+eav ++++H +Dfd La+R+ + sl++T++ +p+s ++ +l ++ge Zjn_sc00261.1.g00020.1.am.mk 77 ASPCFHLALHAANVAIVEAVGDHRAIHLVDFDY------------LADRRVPGTSLKVTTITDPSSPfaqsQTATLPAVGE 145 79***************************95............9*************998889999999** PP GRAS 164 rLakfAeel 172 rL+k+A+++ Zjn_sc00261.1.g00020.1.am.mk 146 RLKKLADRV 154 ****975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03514	5.2E-8	77	154	IPR005202	Transcription factor GRAS

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence Send to blast
MSASNLPAAA QLSRRRPGSL SCIPAASPRR QLLILTPALQ SSSLQWRRRP GPICAATHGA 60 GLRAESSVGL AALTAPASPC FHLALHAANV AIVEAVGDHR AIHLVDFDYL ADRRVPGTSL 120 KVTTITDPSS PFAQSQTATL PAVGERLKKL ADRVARRANV PPDEAEQIRM AIKESLRDIG 180 FKDCSSTPFS RESGSSPPIV LDEYDDGDDD WTAPGSFLID ELQMEEEEVS MLSLVTSMVM 240 LELAAVVPKV LQPARPRRPR SQRQSTGSYF TRSPSAPAHT PLKNRNHTST LIGYFATVAS 300 TFGDEAVRRM QCQRRRAAAR VGDRRLGAAT RVATYGSGAG AATSAVRLHQ GEICGWQI

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence Send to blast

MSASNLPAAA QLSRRRPGSL SCIPAASPRR QLLILTPALQ SSSLQWRRRP GPICAATHGA  60
GLRAESSVGL AALTAPASPC FHLALHAANV AIVEAVGDHR AIHLVDFDYL ADRRVPGTSL  120
KVTTITDPSS PFAQSQTATL PAVGERLKKL ADRVARRANV PPDEAEQIRM AIKESLRDIG  180
FKDCSSTPFS RESGSSPPIV LDEYDDGDDD WTAPGSFLID ELQMEEEEVS MLSLVTSMVM  240
LELAAVVPKV LQPARPRRPR SQRQSTGSYF TRSPSAPAHT PLKNRNHTST LIGYFATVAS  300
TFGDEAVRRM QCQRRRAAAR VGDRRLGAAT RVATYGSGAG AATSAVRLHQ GEICGWQI