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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Zjn_sc00209.1.g00400.1.sm.mk |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family |
Dof |
| Protein Properties |
Length: 347aa MW: 35807.2 Da PI: 9.2019 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00209.1.g00400.1.sm.mk | genome | ZGD | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 118.2 | 3.1e-37 | 84 | 142 | 3 | 61 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
e lkcprCdstntkfCy+nnyslsqPr+fC+aCrryWt+GGalrnvPvGgg r++ k+
Zjn_sc00209.1.g00400.1.sm.mk 84 EPGLKCPRCDSTNTKFCYFNNYSLSQPRHFCRACRRYWTRGGALRNVPVGGGYRRHAKR 142
56789************************************************998765 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009640 | Biological Process | photomorphogenesis |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 347 aa
Download sequence Send
to blast |
MIFSPAFLDS SSWNDNQQQQ QAHHQQVVAS TGDGTSHEQL LQPSIMGGGA LPPEGGGTAQ 60
VVVGPAKPMS MSERARLARI PLPEPGLKCP RCDSTNTKFC YFNNYSLSQP RHFCRACRRY 120
WTRGGALRNV PVGGGYRRHA KRAKPKAAAA AAATPVTTAA ATAVLAPGAA AGSTLSTCTT 180
VNAPALSGQT AMLGGGNLSM LPPLLRLADF DAMSLGSSFT GIGKPTLEAV GNYSIGGASG 240
GAGAGAGLDQ WRLHQQMQGF PFLHAMDQGS LAPSLAMVMP GAFQLGLDNT DSRGAGTGGG 300
EDGSGEINGM APTKREGGYT RGMYGAHHHF TAGYTTSYSN ATGNHLL
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| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC079356 | 1e-105 | AC079356.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 5 clone P0016H04, complete sequence. |
| GenBank | AK108933 | 1e-105 | AK108933.1 Oryza sativa Japonica Group cDNA clone:002-153-A09, full insert sequence. |
| GenBank | AP014961 | 1e-105 | AP014961.1 Oryza sativa Japonica Group DNA, chromosome 5, cultivar: Nipponbare, complete sequence. |
| GenBank | GQ183552 | 1e-105 | GQ183552.1 Oryza sativa Japonica Group Dof-type zinc finger protein 25 gene, partial cds. |
