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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Zjn_sc00193.1.g00180.1.am.mk |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family |
HB-other |
| Protein Properties |
Length: 329aa MW: 35265.8 Da PI: 7.3952 |
| Description |
HB-other family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00193.1.g00180.1.am.mk | genome | ZGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 19.9 | 1.3e-06 | 133 | 150 | 40 | 57 |
-HHHHHHHHHHHHHHHHC CS
Homeobox 40 terqVkvWFqNrRakekk 57
+++V++WFqNrR + ++
Zjn_sc00193.1.g00180.1.am.mk 133 RDANVFYWFQNRRSRSRR 150
689************997 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 329 aa
Download sequence Send
to blast |
MRTKMADPWG QPPGGLPETL EGIEAYACVA AVELTRPAAS ASIYMLHVHE QYSACVHACG 60
DDDGRMFRNS VPAMNDTPYS PATCPSQQHR NPTRAPTGSP KRGQLILPNL RSHLFEPPPL 120
SLTPGRPRFG AVRDANVFYW FQNRRSRSRR RARQLQQACG AAAQLPSAAV IHGVNDSASH 180
YVMHGHGLAR TGSVPTSAPV QSAAAAAPHF FADDVDGGDD LFAISRQMGL LPRGDDHRCG 240
YTANDVSAQL SYHQPTATAT TSIQVFINGV VYEVPGGGAL LDLAGTFGRD AVLVHSSGEI 300
LPVNEQGILM KSLQMGECYY LVGTIIGLH
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor which may be involved in developmental processes. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK107305 | 1e-36 | AK107305.1 Oryza sativa Japonica Group cDNA clone:002-126-D01, full insert sequence. |
| GenBank | AP005249 | 1e-36 | AP005249.3 Oryza sativa Japonica Group genomic DNA, chromosome 8, BAC clone:OSJNBa0087F21. |
| GenBank | AP014964 | 1e-36 | AP014964.1 Oryza sativa Japonica Group DNA, chromosome 8, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012616 | 1e-36 | CP012616.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 8 sequence. |
