PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00174.1.g00150.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 401aa MW: 43747 Da PI: 10.575

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00174.1.g00150.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	36.4	1.2e-11	50	77	2	29
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtP 29 prlrWtp+LH +Fv+ave+LGG+e P Zjn_sc00174.1.g00150.1.am.mk 50 PRLRWTPDLHMAFVHAVERLGGQEMYSP 77 8**********************97666 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.5E-9	46	75	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence Send to blast
MSRIGSSDPQ DKGVRSTRDS ESKKGGGGKV EGSGEKRVPT VRPYNRSKLP RLRWTPDLHM 60 AFVHAVERLG GQEMYSPMDF HFMRGDQRFH GMPFLQRAAA ISSSVSEPGG FFASSNGGGL 120 EVSRLHGLLQ HRQSQMQRFD FRSSSFRRHE WALNQREEII TRKDVLKPPS TSGPQPHHPL 180 APSPAALRSE RGWWPFTDAG AGVVAAGGEH TRADTGNDVN FGGSSGSSSR PIPWGASGDH 240 HLPFRWRPGS GRSNVVDHVS NNIAMIKRPP DPVLIDQAPG DAQKLEWKKH VEPRPSTSRP 300 ADGACRKRLL PEAQDLAAPD LQLRLSPTTA LDAKKRKNTA AGDGQEIIYS CELSISLSLS 360 PPAAASIQQQ HPPREKTRGS SGEAVLGQST LDLTMSIRAL E

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence Send to blast

MSRIGSSDPQ DKGVRSTRDS ESKKGGGGKV EGSGEKRVPT VRPYNRSKLP RLRWTPDLHM  60
AFVHAVERLG GQEMYSPMDF HFMRGDQRFH GMPFLQRAAA ISSSVSEPGG FFASSNGGGL  120
EVSRLHGLLQ HRQSQMQRFD FRSSSFRRHE WALNQREEII TRKDVLKPPS TSGPQPHHPL  180
APSPAALRSE RGWWPFTDAG AGVVAAGGEH TRADTGNDVN FGGSSGSSSR PIPWGASGDH  240
HLPFRWRPGS GRSNVVDHVS NNIAMIKRPP DPVLIDQAPG DAQKLEWKKH VEPRPSTSRP  300
ADGACRKRLL PEAQDLAAPD LQLRLSPTTA LDAKKRKNTA AGDGQEIIYS CELSISLSLS  360
PPAAASIQQQ HPPREKTRGS SGEAVLGQST LDLTMSIRAL E

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025824409.1	1e-127	uncharacterized protein LOC112899951 isoform X1
TrEMBL	A0A0A9QQ16	1e-126	A0A0A9QQ16_ARUDO; Uncharacterized protein
TrEMBL	A0A1E5V647	1e-125	A0A1E5V647_9POAL; Uncharacterized protein
STRING	Si016955m	1e-123	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2754	36	86

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	4e-13	G2-like family protein