PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00167.1.g00080.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 401aa    MW: 43063 Da    PI: 6.7337
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00167.1.g00080.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY41.62.4e-13183239359
                                   -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTT.....EEEEEEES--SS- CS
                          WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpk.....vveitYegeHnhe 59 
                                   Dgy+WrKYGqK+++g+ +p      + +gCp+k+ v+r+++  +     + +++Y  eH+++
  Zjn_sc00167.1.g00080.1.am.mk 183 DGYQWRKYGQKQIEGAMYPS-----AEQGCPAKRTVQRNDDGDDiggspMYTVVYMAEHTCT 239
                                   9***************9996.....589***********95433333337899******985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-14171239IPR003657WRKY domain
SuperFamilySSF1182902.62E-13177240IPR003657WRKY domain
SMARTSM007747.6E-17181240IPR003657WRKY domain
PfamPF031064.0E-15183238IPR003657WRKY domain
PROSITE profilePS5081111.485183236IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    Send to blast
LGPGRARELH GSCSGGGQLC RTSRDPAGAK GREGEELRWR RAKWLGGCVW RLGDCARRSG  60
REMVWRGGSG GFGCGEALCA SGGDGYGTGL KNLDRAVCAT GPCHTGPWHG LREEGGPELE  120
LRELLLPNRS NGAWSCTTHP ATTRHGSKRV GNKDEELAPT CSKRRKKKHG ISACLVTSVP  180
DFDGYQWRKY GQKQIEGAMY PSAEQGCPAK RTVQRNDDGD DIGGSPMYTV VYMAEHTCTF  240
NDSMEAPVIL ETTAVQAAYK RPCSAKNIAA PAAFLPPEAE ARHDPAAVDS ATATESSVSG  300
PASTIVTKTG TAESPVTSDV TWSGTANNNE QHVVGDLPYD GLLAVDDRWA EMSSPLVHQD  360
MDDFTGPIRS PVHIAAGDWT TVDHLHLFNE PIRHFSAGFL F
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004977390.12e-58probable WRKY transcription factor 58
TrEMBLA0A0A9HC424e-66A0A0A9HC42_ARUDO; Uncharacterized protein
STRINGSi010813m8e-58(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP57603058
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40750.11e-09WRKY DNA-binding protein 54