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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00148.1.g00850.1.sm.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NF-YA | ||||||||
Protein Properties | Length: 162aa MW: 18045.6 Da PI: 10.1358 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 41.2 | 5.3e-13 | 107 | 143 | 3 | 40 |
CBFB_NFYA 3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylh 40 ++YVNaKQ+++Il+RR +Rak+++e+++ + +rk h Zjn_sc00148.1.g00850.1.sm.mk 107 AIYVNAKQFKGILRRRLARAKAARERRV-SMKRKVTNH 143 69**************************.666665555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00521 | 4.8E-4 | 103 | 159 | IPR001289 | Nuclear transcription factor Y subunit A |
PROSITE profile | PS51152 | 13.853 | 104 | 162 | IPR001289 | Nuclear transcription factor Y subunit A |
Pfam | PF02045 | 3.8E-12 | 107 | 144 | IPR001289 | Nuclear transcription factor Y subunit A |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence Send to blast |
MNLNYQEHGM GFLQGAGAAH KFTPISAAGV SYLGKQLAFH EPSAPTSFAY PAWQQDYSGC 60 FDLALGQSMA CNVDQRHDYG VCSTYGAHVV GRRKVLLQPA ITVEEPAIYV NAKQFKGILR 120 RRLARAKAAR ERRVSMKRKV TNHAAESFSS RSSCTFLHFF FH |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015645550.1 | 2e-28 | nuclear transcription factor Y subunit A-2 | ||||
TrEMBL | A0A0A9ILA9 | 8e-49 | A0A0A9ILA9_ARUDO; Uncharacterized protein | ||||
STRING | OPUNC07G03530.1 | 4e-30 | (Oryza punctata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP47196 | 3 | 3 |