PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00138.1.g00550.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 882aa    MW: 95945 Da    PI: 7.0162
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00138.1.g00550.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM52.61.5e-166427677127
                           NAM   7 FhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk....kvkaeek.ewyfFskrdkkyatgkrknratksg 81 
                                   F+Ptdeel+ +yL ++  gk+  ++ v +++ +  +++Pw+L +    ++  +++   +f+++ ++     +r++r    g
  Zjn_sc00138.1.g00550.1.am.mk 642 FDPTDEELIEHYLLPRSLGKPEAFSVViVEDNKAANTQPWKLFQnhdlMALIDDHlPAFFYVRDERP--DARRSRRCEGGG 720
                                   9********************777666356669*********6334542222444355777777664..567999999999 PP

                           NAM  82 yWkatgk....dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                                    Wk + +    d++vl   ++++ ++++ L ++  +     +  Wvmhe+ 
  Zjn_sc00138.1.g00550.1.am.mk 721 WWKIQKSeskdDRHVLIVgGRKVRWTRNNLNLHLDSG----SVGWVMHEFF 767
                                   9*966542333566666556777899*******5443....568*****96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF484033.57E-351539IPR020683Ankyrin repeat-containing domain
CDDcd002047.93E-1264192No hitNo description
PfamPF127968.5E-989162IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484033.57E-3590386IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.207.5E-4195390IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029738.807100392IPR020683Ankyrin repeat-containing domain
SMARTSM0024826100129IPR002110Ankyrin repeat
CDDcd002047.46E-15135268No hitNo description
PROSITE profilePS500888.763138170IPR002110Ankyrin repeat
SMARTSM002480.2138167IPR002110Ankyrin repeat
SMARTSM00248650172201IPR002110Ankyrin repeat
CDDcd002049.02E-17205335No hitNo description
SMARTSM0024880205242IPR002110Ankyrin repeat
PfamPF127963.7E-7228300IPR020683Ankyrin repeat-containing domain
SMARTSM002486.1247276IPR002110Ankyrin repeat
SMARTSM002482300281309IPR002110Ankyrin repeat
CDDcd002049.54E-6316386No hitNo description
SMARTSM002484000321351IPR002110Ankyrin repeat
SMARTSM002482100355389IPR002110Ankyrin repeat
PfamPF139621.5E-20408518IPR026961PGG domain
PROSITE profilePS5100519.434636799IPR003441NAC domain
SuperFamilySSF1019411.16E-19642773IPR003441NAC domain
PfamPF023653.1E-12642766IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 882 aa     Download sequence    Send to blast
MPNAAAAQLQ PELLRAAKRG DWSRLGDLRS EEELAFVPEV VVDIDVDSDP PAATKWTHAY  60
GPGSVLHVVA AGGEDDAFLT GVTEIYGKAK HLLADSCDAK GDTPLHCTAR SGSVKMLSSF  120
VDLAGSRVQT ALRKRNRSGE TVLHEAVRWA DEEMVRVLVS ADAGLARVPR GNSASPLYLA  180
ILLGHDGIAE LLHAMDDRLS YSGPDGQNAL HVAVLRSETS RNSPMSPTVA KLLLEADESS  240
AYQSDNNGSF PIHAAASGKN TDFIRVLLQR CPDCAQLRDG RGRTFLHIAV ENDPAPFRSL  300
LPLKGNQVRR FAAILNAQDD EGSTVLHLAV KAGRPLTIYP LMWSKEVQLN LQNQKGQTAL  360
DLSLSKKPSG DPNLRIHDLL ISAGANYGVQ RGGEKARDPP LDPKVEAKKI KDSTTTIGVV  420
SVLIITISFA AAFQLPGGYT SDRPPKGTPE LAKKYSFEAF LIANNLALLC ATMATISLMY  480
AGVSIVDINT RMIAFFTSIF FLNSSARSLA AAFVFGTQAV LAPVDHAASV VTWLAAGLIL  540
LDIAWFTCNI CLEHIVLKNR LGTKAYIRAA CSLVSVPLGA LWPYVVVGKG HRLGLAARSS  600
YAYRPRRNRA RPPPRHPGAA LPPHPIIRDQ PRGTGHVNTR IFDPTDEELI EHYLLPRSLG  660
KPEAFSVVIV EDNKAANTQP WKLFQNHDLM ALIDDHLPAF FYVRDERPDA RRSRRCEGGG  720
WWKIQKSESK DDRHVLIVGG RKVRWTRNNL NLHLDSGSVG WVMHEFFIDD HPLLKPDGHS  780
HDDASLGGEQ PVTQRLLVTA AAGSSSADST TTTTSLDQNL GTAHASEDQE HPSASAMPMP  840
IHNSRADLDP VNIIYDGEFQ ALLATADAAM APFRVLFNHD EE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6moj_A1e-1314336415217Dimeric DARPin ACR5 (A_angle_R5)
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003562102.20.0protein ACCELERATED CELL DEATH 6
TrEMBLA0A2K2DVC20.0A0A2K2DVC2_BRADI; Uncharacterized protein
STRINGPavir.Gb01904.1.p1e-166(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19922