PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Zjn_sc00112.1.g00680.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 115aa MW: 12846.4 Da PI: 6.7493

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00112.1.g00680.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	45.6	1.4e-14	8	65	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dD y+W G + g p +++C+ ++C+vkk v s + ++ve++Y+g+Hnh Zjn_sc00112.1.g00680.1.am.mk 8 DDCYTWMNSGYQAIPGWGSPTIFFQCACENCMVKKSVTLSVDGRQIVETIYRGSHNHA 65 8********************************************************6 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50811	14.561	2	67	IPR003657	WRKY domain
SuperFamily	SSF118290	3.53E-14	5	67	IPR003657	WRKY domain
Gene3D	G3DSA:2.20.25.80	2.7E-12	7	67	IPR003657	WRKY domain
SMART	SM00774	1.1E-4	7	66	IPR003657	WRKY domain
Pfam	PF03106	1.2E-10	8	64	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 115 aa Download sequence Send to blast
MSSLCSADDC YTWMNSGYQA IPGWGSPTIF FQCACENCMV KKSVTLSVDG RQIVETIYRG 60 SHNHARPSER LLRDVLTPFQ PNSQHNVLPD VSVDETSMRR ARKGGAKLQY SADDD

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021320386.1	1e-22	probable WRKY transcription factor 58 isoform X3
TrEMBL	A0A1Z5R8G0	8e-20	A0A1Z5R8G0_SORBI; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP35885	3	4

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07100.2	4e-17	WRKY DNA-binding protein 26