PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00112.1.g00080.1.sm.mkhc

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 395aa MW: 43084.7 Da PI: 8.4393

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00112.1.g00080.1.sm.mkhc	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	38.1	3.3e-12	98	129	2	33
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLee 33 +++k+ rr+++NReAAr+sR+RKka+i+ Le Zjn_sc00112.1.g00080.1.sm.mkhc 98 PSDKALRRLAQNREAARKSRLRKKAYIQALES 129 589***************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	9.9E-7	97	161	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.8E-7	98	134	No hit	No description
Pfam	PF00170	7.6E-9	99	129	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	9.85E-7	101	136	No hit	No description
PROSITE pattern	PS00036	0	104	119	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	8.3E-27	187	259	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence Send to blast
MTSASVRRPP MGIYDYDRRA RQQPFPAWAG EPPFRADSVA AQAVATGAPP PAVVVGVVEP 60 EVKFVSRVAV AEDDAPLADS PGPPSSDSFG HDRDDAGPSD KALRRLAQNR EAARKSRLRK 120 KAYIQALESS RLKLAWMEQE LAAVRRQQGA FVGGSVGESA PTLVDSGVAA FEMEYARWME 180 EQARQAGELR AALQSDASEL HLRVLVDAGL AHYDALFGAK SAAARRDAFF VLSGAWRAPT 240 ERFFHWIGGF RPSEVLKTLE PQLEPLAEQQ RAEVRALQQT ARQLEDALSQ GLDKLQQTLT 300 EALLATTAAI DAPHDGGGGY ANVPPQQQMA GVFGRLDGLP RFVDQADHLR QQTLRNMRKI 360 LAPRQAAQGL LALADYCQRL RALSSLWAAR PREPA

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence Send to blast

MTSASVRRPP MGIYDYDRRA RQQPFPAWAG EPPFRADSVA AQAVATGAPP PAVVVGVVEP  60
EVKFVSRVAV AEDDAPLADS PGPPSSDSFG HDRDDAGPSD KALRRLAQNR EAARKSRLRK  120
KAYIQALESS RLKLAWMEQE LAAVRRQQGA FVGGSVGESA PTLVDSGVAA FEMEYARWME  180
EQARQAGELR AALQSDASEL HLRVLVDAGL AHYDALFGAK SAAARRDAFF VLSGAWRAPT  240
ERFFHWIGGF RPSEVLKTLE PQLEPLAEQQ RAEVRALQQT ARQLEDALSQ GLDKLQQTLT  300
EALLATTAAI DAPHDGGGGY ANVPPQQQMA GVFGRLDGLP RFVDQADHLR QQTLRNMRKI  360
LAPRQAAQGL LALADYCQRL RALSSLWAAR PREPA

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT034698	5e-39	BT034698.1 Zea mays full-length cDNA clone ZM_BFb0012B03 mRNA, complete cds.
GenBank	BT038664	5e-39	BT038664.1 Zea mays full-length cDNA clone ZM_BFb0304N24 mRNA, complete cds.
GenBank	EU956720	5e-39	EU956720.1 Zea mays clone 1571658 transcription factor TGA4 mRNA, complete cds.
GenBank	KJ727561	5e-39	KJ727561.1 Zea mays clone pUT5421 bZIP transcription factor (bZIP107) mRNA, partial cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025820316.1	1e-142	transcription factor TGA2.3-like isoform X2
Swissprot	A0A0P0WFC8	1e-109	TGAL6_ORYSJ; Transcription factor TGAL6
TrEMBL	A0A0A9HNG7	1e-155	A0A0A9HNG7_ARUDO; Uncharacterized protein
STRING	Sb07g004900.1	1e-139	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3571	38	77

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77920.1	1e-103	bZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Okada A, et al. OsTGAP1, a bZIP transcription factor, coordinately regulates the inductive production of diterpenoid phytoalexins in rice. J. Biol. Chem., 2009. 284(39): p. 26510-8 [PMID:19635799] Okada K The biosynthesis of isoprenoids and the mechanisms regulating it in plants. Biosci. Biotechnol. Biochem., 2011. 75(7): p. 1219-25 [PMID:21737944] Yamane H Biosynthesis of phytoalexins and regulatory mechanisms of it in rice. Biosci. Biotechnol. Biochem., 2013. 77(6): p. 1141-8 [PMID:23748776] Miyamoto K, et al. Identification of target genes of the bZIP transcription factor OsTGAP1, whose overexpression causes elicitor-induced hyperaccumulation of diterpenoid phytoalexins in rice cells. PLoS ONE, 2014. 9(8): p. e105823 [PMID:25157897] Miyamoto K, et al. Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells. J. Plant Physiol., 2015. 173: p. 19-27 [PMID:25462074]