PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00107.1.g00670.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 620aa    MW: 66253.5 Da    PI: 8.7043
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00107.1.g00670.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.14.2e-29359416359
                                   -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   D ++WrKYGqK++kgs++pr+YYrC++  +C+++k+ver+++dp ++++tY+geH h+
  Zjn_sc00107.1.g00670.1.am.mk 359 DLWAWRKYGQKPIKGSPYPRGYYRCSTDkDCKARKQVERCRDDPGTLIVTYTGEHSHP 416
                                   99***********************9998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.1E-30348418IPR003657WRKY domain
PROSITE profilePS5081131.272352418IPR003657WRKY domain
SuperFamilySSF1182905.1E-26355418IPR003657WRKY domain
SMARTSM007741.2E-35357417IPR003657WRKY domain
PfamPF031061.5E-24359416IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 620 aa     Download sequence    Send to blast
MQRRAASESQ SHPARRCWRR LTGATPRAPR QEPCDPIIVH RIIVIRGFDP MGCVVVHKTL  60
PDVTLAIGRK LRPMALSLTS SIFFSVLARS LRCVPNLVKQ TFPIGQGTYG AAAADPVGVR  120
LKARPDTSVT RRDVRSPGRS TNAKRSPAFR AFLSRIHRPA GPHHNPLPLP PPQPRRQKQL  180
RLASLRWKSS RSQRLLPALL SVRPYSERRE LEEPAGEMEG DLGWCRGGGS SSNNWDLHAV  240
VRLACGDAAP SSSVPPSDDA DDAFPWPGPL QPLLTDPAVD GLCQALLAAP KQEAAPLSSP  300
RNEAPATTQQ PAPPAEEAPA KPLASGRGGG RPTRSKRKSK KSQVNKEVTR VAAGAPSPDL  360
WAWRKYGQKP IKGSPYPRGY YRCSTDKDCK ARKQVERCRD DPGTLIVTYT GEHSHPVPLH  420
RSSLAGTTRS KPQQQPSAAS PTAEETESQQ AQSPALASST AEETQQQGTP SACTGLSPST  480
PLRLPSVGVE YEDEEDDDTL AVRLLLEDTE MAAEDDALLF FQPDEPAPLG VPGSGVGCDD  540
EPAPMSGNGS GVCDDAKLFH NNKPDEPAGP PGTPSEPQGP QRTMVSAGIA NVDGGTASVI  600
NFVDEKFSAA AAAAASGWGL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B7e-173594181879Disease resistance protein RRS1
5w3x_D7e-173594181879Disease resistance protein RRS1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1171178PQPRRQKQ
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0686098e-70BT068609.2 Zea mays full-length cDNA clone ZM_BFb0349G13 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025812935.11e-105WRKY transcription factor 22-like
TrEMBLA0A1E5VAE71e-108A0A1E5VAE7_9POAL; WRKY transcription factor 22
STRINGSi008820m1e-104(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP125622536
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.12e-41WRKY family protein