PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Zjn_sc00106.1.g01420.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GeBP

Protein Properties

Length: 652aa MW: 72136.9 Da PI: 10.8743

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00106.1.g01420.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	80	3.8e-25	229	332	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkep.. 78 ++ r+ws eDe+++L++li f+ k+g + +d+ ++ +++ +++ +k+s++ql++KirrLK+K+k +ak+g+ep Zjn_sc00106.1.g01420.1.am.mk 229 RPPRVWSPEDEVTILRALIAFQGKKGRlpASIQDTAKLESQIGGQLIAKASTTQLSDKIRRLKHKYKLLAIRAKKGREPdl 309 578**********************777888*****************************998888777766500 PP DUF573 79 ....sfskehdqkifelskkiWg 97 ++ +h+++++elskk+Wg Zjn_sc00106.1.g01420.1.am.mk 310 erepDLPMDHEREVYELSKKVWG 332 000055678***********8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	2.1E-23	231	332	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 652 aa Download sequence Send to blast
MAPKRPATGA AAAASGSASN ASDAEGDAGH QRRRRHSPSP ARTRSRSRSK TPPTNLRPNA 60 AALSATPIST GADYAAASDS DADGRDQSPR RRRERYPTPR SYSDADAAGR VPSPRRDRQR 120 SPRLYSDSDS DADAAAGGRI SSLRRSRDRS PRLHSEPDNS GATEGGGEGN VSPLPRARRS 180 TRIETSNIKP VSSRLMDEQR RSAGAASSQR RSKRRLRSPA LPSAEHHKRP PRVWSPEDEV 240 TILRALIAFQ GKKGRLPASI QDTAKLESQI GGQLIAKAST TQLSDKIRRL KHKYKLLAIR 300 AKKGREPDLE REPDLPMDHE REVYELSKKV WGAIGGSLTY ENAGDEESNE EQEIEESDEG 360 MDSGSKASQG GGGGKDYPGK GQQMYPYLWE AVEELSKNHP SGQIFRKAFG VLEKAKARVM 420 EEKLRKFRMS EIRQQLRRMD LMKETVTMVL DALEGTAAQA GLFHEPQGCL RAASRSRLAF 480 QAFFPVTKPP LPSSFFPCTC TLAPGHGRLL LNYGNSRVTQ VQRLRSGPCN EKGFISPCHA 540 WTEAAHKYSK LHAKITRTEK ATEQHQHNWL QRRLHPSVNP TTSTRSTHER RNYRLLLETE 600 RTGGKLAPSP AWPASNTAAE AEITGRGQGR CICRKEKIQR KATGTRQFPL RI

Sequence ? help Back to Top

Protein Sequence Length: 652 aa Download sequence Send to blast

MAPKRPATGA AAAASGSASN ASDAEGDAGH QRRRRHSPSP ARTRSRSRSK TPPTNLRPNA  60
AALSATPIST GADYAAASDS DADGRDQSPR RRRERYPTPR SYSDADAAGR VPSPRRDRQR  120
SPRLYSDSDS DADAAAGGRI SSLRRSRDRS PRLHSEPDNS GATEGGGEGN VSPLPRARRS  180
TRIETSNIKP VSSRLMDEQR RSAGAASSQR RSKRRLRSPA LPSAEHHKRP PRVWSPEDEV  240
TILRALIAFQ GKKGRLPASI QDTAKLESQI GGQLIAKAST TQLSDKIRRL KHKYKLLAIR  300
AKKGREPDLE REPDLPMDHE REVYELSKKV WGAIGGSLTY ENAGDEESNE EQEIEESDEG  360
MDSGSKASQG GGGGKDYPGK GQQMYPYLWE AVEELSKNHP SGQIFRKAFG VLEKAKARVM  420
EEKLRKFRMS EIRQQLRRMD LMKETVTMVL DALEGTAAQA GLFHEPQGCL RAASRSRLAF  480
QAFFPVTKPP LPSSFFPCTC TLAPGHGRLL LNYGNSRVTQ VQRLRSGPCN EKGFISPCHA  540
WTEAAHKYSK LHAKITRTEK ATEQHQHNWL QRRLHPSVNP TTSTRSTHER RNYRLLLETE  600
RTGGKLAPSP AWPASNTAAE AEITGRGQGR CICRKEKIQR KATGTRQFPL RI

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025821022.1	1e-157	serine/arginine repetitive matrix protein 1-like
TrEMBL	A0A0A9BR30	1e-173	A0A0A9BR30_ARUDO; Uncharacterized protein
STRING	Si013598m	1e-150	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2671	35	87

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	8e-12	DNA-binding storekeeper protein-related transcriptional regulator