PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00098.1.g00730.1.sm.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 443aa    MW: 46998.4 Da    PI: 7.4364
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00098.1.g00730.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY83.91.6e-26258317258
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                                   dDgy+WrKYGqK++ gs++prsYYrCt++   gC++kkkv+r ++dp + e+tY g+H++
  Zjn_sc00098.1.g00730.1.sm.mk 258 DDGYTWRKYGQKDILGSRYPRSYYRCTHKtyyGCEAKKKVQRLDDDPFTYEVTYCGNHTC 317
                                   8***************************9999**************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.9E-26253317IPR003657WRKY domain
SuperFamilySSF1182904.71E-24255317IPR003657WRKY domain
SMARTSM007741.2E-36257319IPR003657WRKY domain
PROSITE profilePS5081122.068258315IPR003657WRKY domain
PfamPF031061.4E-24258317IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 443 aa     Download sequence    Send to blast
MACNTDPLVI KSGTGQIASS PASPSEASQT PLFMQVLAGH PHPQHSFTLD HLRGSVNINQ  60
KITGDELLGQ LGAMDDVLSQ IHEAFQLASQ LMQELSGGQN DPAYLAERCH GIARAYAAAI  120
RMLQPHGRTE VGATQLPPPS ASDLLRQWRP DHREAGGTAA NNPFLGSSPS AQLGHLLEPS  180
SFHTLAEAFR ATRAHEMVRT GADVAGTSGG PVRRVAPSSR GSPPIQPRQG RRRRESGERR  240
TVMVPAHRAG GDTDQPPDDG YTWRKYGQKD ILGSRYPRSY YRCTHKTYYG CEAKKKVQRL  300
DDDPFTYEVT YCGNHTCLTS TTPLLTLPAT ATTDAVTTNS PTSSGAILAQ DLAVVTAERH  360
PAPALSTAIQ LGMSSMPSSL VGASSSAGGG GEGNGAPANV PISGTGREME YPVMDLADAM  420
FNSGSSGGSS MDAIFSSPRP RDR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-21258317968OsWRKY45
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2878175e-89AK287817.1 Oryza sativa Japonica Group cDNA, clone: J065181J09, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022681211.11e-121probable WRKY transcription factor 53
TrEMBLA0A3B6PH691e-119A0A3B6PH69_WHEAT; Uncharacterized protein
STRINGBRADI2G30800.11e-116(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97963344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.13e-32WRKY DNA-binding protein 55